RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 C15orf52Q6ZUT6 534 aaKnown RBP12.99□□□□□ -0.33
CLN5-213ENST00000636681 SPATA5Q8NB90 893 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
CLN5-213ENST00000636681 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
CLN5-213ENST00000636681 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 ERC2O15083 957 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
CLN5-213ENST00000636681 IL25Q9H293 177 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
CLN5-213ENST00000636681 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
CLN5-213ENST00000636681 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 PSMD1Q99460 953 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 ECE2O60344 883 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 SEC24BO95487 1268 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
CLN5-213ENST00000636681 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
CLN5-213ENST00000636681 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.33
CLN5-213ENST00000636681 IL1R1P14778 569 aa12.96□□□□□ -0.34
CLN5-213ENST00000636681 GTF2IP78347 998 aa12.96□□□□□ -0.34
CLN5-213ENST00000636681 EYA3Q99504 573 aa12.96□□□□□ -0.34
CLN5-213ENST00000636681 PRDX5P30044 214 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
CLN5-213ENST00000636681 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLN5-213ENST00000636681 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
CLN5-213ENST00000636681 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 ABCF2Q9UG63 623 aa12.95□□□□□ -0.34
CLN5-213ENST00000636681 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
CLN5-213ENST00000636681 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 G3V3G9 751 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 IDH1O75874 414 aaKnown RBP12.94□□□□□ -0.34
CLN5-213ENST00000636681 RAD17O75943 681 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
CLN5-213ENST00000636681 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 CHMLP26374 656 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 GPR162Q16538 588 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 CCDC129Q6ZRS4 1044 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
CLN5-213ENST00000636681 F8W031 263 aaPredicted RBP12.92□□□□□ -0.34
CLN5-213ENST00000636681 NMIQ13287 307 aaPredicted RBP12.92□□□□□ -0.34
CLN5-213ENST00000636681 TTLL5Q6EMB2 1281 aa12.92□□□□□ -0.34
CLN5-213ENST00000636681 CDK5RAP2Q96SN8 1893 aa12.92□□□□□ -0.34
CLN5-213ENST00000636681 CDC45O75419 566 aa12.92□□□□□ -0.34
CLN5-213ENST00000636681 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
CLN5-213ENST00000636681 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
CLN5-213ENST00000636681 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
CLN5-213ENST00000636681 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 SEMA3EO15041 775 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 DACT2Q5SW24 774 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
CLN5-213ENST00000636681 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
CLN5-213ENST00000636681 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 M0R2C6 588 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 PSMD14O00487 310 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 PDE6AP16499 860 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 KCNA4P22459 653 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 MECOMQ03112 1051 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 CXCL9Q07325 125 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
CLN5-213ENST00000636681 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 ZNF541Q9H0D2 1346 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
CLN5-213ENST00000636681 SCNN1DP51172 638 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
CLN5-213ENST00000636681 ZNRF3Q9ULT6 936 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 BAZ2AQ9UIF9 1905 aaKnown RBP12.89□□□□□ -0.35
CLN5-213ENST00000636681 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
CLN5-213ENST00000636681 ADD2P35612 726 aa12.89□□□□□ -0.35
CLN5-213ENST00000636681 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms