RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TTLL12Q14166 644 aaPredicted RBP23.1■■□□□ 1.29
CLN6-214ENST00000636314 API5Q9BZZ5 524 aaKnown RBP23.1■■□□□ 1.29
CLN6-214ENST00000636314 KIF16BQ96L93 1317 aa23.09■■□□□ 1.29
CLN6-214ENST00000636314 UBE2Q2LH0YL09 131 aa23.09■■□□□ 1.29
CLN6-214ENST00000636314 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
CLN6-214ENST00000636314 RABL6Q3YEC7 729 aaPredicted RBP23.09■■□□□ 1.29
CLN6-214ENST00000636314 PRAMEF18Q5VWM3 479 aa23.09■■□□□ 1.29
CLN6-214ENST00000636314 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
CLN6-214ENST00000636314 NBPF9Q3BBW0 867 aa23.08■■□□□ 1.29
CLN6-214ENST00000636314 MXD3Q9BW11 206 aa23.08■■□□□ 1.29
CLN6-214ENST00000636314 SNAP23O00161 211 aa23.07■■□□□ 1.28
CLN6-214ENST00000636314 PLIN1O60240 522 aa23.07■■□□□ 1.28
CLN6-214ENST00000636314 ANKRD44Q8N8A2 993 aa23.07■■□□□ 1.28
CLN6-214ENST00000636314 MYO3BQ8WXR4 1341 aa23.07■■□□□ 1.28
CLN6-214ENST00000636314 DACT2Q5SW24 774 aa23.06■■□□□ 1.28
CLN6-214ENST00000636314 STRIP1Q5VSL9 837 aa23.06■■□□□ 1.28
CLN6-214ENST00000636314 OGFOD1Q8N543 542 aa23.06■■□□□ 1.28
CLN6-214ENST00000636314 HDAC9Q9UKV0 1011 aa23.06■■□□□ 1.28
CLN6-214ENST00000636314 TBC1D8O95759 1140 aa23.05■■□□□ 1.28
CLN6-214ENST00000636314 C15orf52Q6ZUT6 534 aaKnown RBP23.05■■□□□ 1.28
CLN6-214ENST00000636314 IRS2Q9Y4H2 1338 aa23.05■■□□□ 1.28
CLN6-214ENST00000636314 NF2P35240 595 aa23.04■■□□□ 1.28
CLN6-214ENST00000636314 MKRN3Q13064 507 aaKnown RBP23.04■■□□□ 1.28
CLN6-214ENST00000636314 ZNF804AQ7Z570 1209 aa23.04■■□□□ 1.28
CLN6-214ENST00000636314 PUS3Q9BZE2 481 aaKnown RBP23.04■■□□□ 1.28
CLN6-214ENST00000636314 CD209Q9NNX6 404 aa23.04■■□□□ 1.28
CLN6-214ENST00000636314 WNT10BO00744 389 aa23.03■■□□□ 1.28
CLN6-214ENST00000636314 SASH1O94885 1247 aa23.03■■□□□ 1.28
CLN6-214ENST00000636314 UBTFL1P0CB47 393 aaPredicted RBP23.03■■□□□ 1.28
CLN6-214ENST00000636314 TTLL5Q6EMB2 1281 aa23.03■■□□□ 1.28
CLN6-214ENST00000636314 HPS5Q9UPZ3 1129 aa23.03■■□□□ 1.28
CLN6-214ENST00000636314 MROH5Q6ZUA9 1318 aa23.03■■□□□ 1.28
CLN6-214ENST00000636314 GTF2IP78347 998 aa23.02■■□□□ 1.28
CLN6-214ENST00000636314 ZNF296Q8WUU4 475 aaPredicted RBP23.02■■□□□ 1.28
CLN6-214ENST00000636314 ARHGAP45Q92619 1136 aa23.02■■□□□ 1.28
CLN6-214ENST00000636314 PRKG1Q13976 671 aa23■■□□□ 1.27
CLN6-214ENST00000636314 UBE4AQ14139 1066 aa23■■□□□ 1.27
CLN6-214ENST00000636314 PKN2Q16513 984 aaKnown RBP23■■□□□ 1.27
CLN6-214ENST00000636314 METTL24Q5JXM2 366 aa23■■□□□ 1.27
CLN6-214ENST00000636314 RIPOR2Q9Y4F9 1068 aa23■■□□□ 1.27
CLN6-214ENST00000636314 ECM29Q5VYK3 1845 aa23■■□□□ 1.27
CLN6-214ENST00000636314 IPO8O15397 1037 aaKnown RBP22.99■■□□□ 1.27
CLN6-214ENST00000636314 IL1R1P14778 569 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 TM4SF4P48230 202 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 LRRC24Q50LG9 513 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 ARMC9Q7Z3E5 817 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 KLHDC4Q8TBB5 520 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 ZBED9Q6R2W3 1325 aa22.99■■□□□ 1.27
CLN6-214ENST00000636314 SREBF2Q12772 1141 aa22.98■■□□□ 1.27
CLN6-214ENST00000636314 APOBEC3FQ8IUX4 373 aaKnown RBP22.98■■□□□ 1.27
CLN6-214ENST00000636314 KIAA0825Q8IV33 1275 aa22.98■■□□□ 1.27
CLN6-214ENST00000636314 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
CLN6-214ENST00000636314 HDAC5Q9UQL6 1122 aa22.98■■□□□ 1.27
CLN6-214ENST00000636314 GPR25O00155 361 aa22.97■■□□□ 1.27
CLN6-214ENST00000636314 BCAR3O75815 825 aa22.97■■□□□ 1.27
CLN6-214ENST00000636314 MMP14P50281 582 aa22.97■■□□□ 1.27
CLN6-214ENST00000636314 PTPN12Q05209 780 aaKnown RBP22.97■■□□□ 1.27
CLN6-214ENST00000636314 ARAP2Q8WZ64 1704 aa22.96■■□□□ 1.27
CLN6-214ENST00000636314 TRIM27P14373 513 aa22.96■■□□□ 1.27
CLN6-214ENST00000636314 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
CLN6-214ENST00000636314 MEIS3Q99687 375 aa22.96■■□□□ 1.27
CLN6-214ENST00000636314 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
CLN6-214ENST00000636314 PCDH10Q9P2E7 1040 aa22.96■■□□□ 1.27
CLN6-214ENST00000636314 LRRFIP2Q9Y608 721 aaKnown RBP22.96■■□□□ 1.27
CLN6-214ENST00000636314 GYG1P46976 350 aa22.95■■□□□ 1.26
CLN6-214ENST00000636314 ATF7IPQ6VMQ6 1270 aa22.95■■□□□ 1.26
CLN6-214ENST00000636314 ANGEL1Q9UNK9 670 aaKnown RBP22.95■■□□□ 1.26
CLN6-214ENST00000636314 PDE8BO95263 885 aa22.94■■□□□ 1.26
CLN6-214ENST00000636314 HIBADHP31937 336 aaKnown RBP22.94■■□□□ 1.26
CLN6-214ENST00000636314 RFX5P48382 616 aaPredicted RBP22.94■■□□□ 1.26
CLN6-214ENST00000636314 PRPF38BQ5VTL8 546 aaKnown RBP22.94■■□□□ 1.26
CLN6-214ENST00000636314 VGLL2Q8N8G2 317 aa22.94■■□□□ 1.26
CLN6-214ENST00000636314 JAG2Q9Y219 1238 aa22.94■■□□□ 1.26
CLN6-214ENST00000636314 EYA2O00167 538 aa22.93■■□□□ 1.26
CLN6-214ENST00000636314 FKTNO75072 461 aa22.93■■□□□ 1.26
CLN6-214ENST00000636314 NOM1Q5C9Z4 860 aaKnown RBP22.93■■□□□ 1.26
CLN6-214ENST00000636314 FBXO46Q6PJ61 603 aaPredicted RBP22.93■■□□□ 1.26
CLN6-214ENST00000636314 VPS37DQ86XT2 251 aa22.93■■□□□ 1.26
CLN6-214ENST00000636314 CERS5Q8N5B7 392 aa22.93■■□□□ 1.26
CLN6-214ENST00000636314 GNAI3P08754 354 aa22.92■■□□□ 1.26
CLN6-214ENST00000636314 FKBP1AP62942 108 aaKnown RBP22.92■■□□□ 1.26
CLN6-214ENST00000636314 TDRD7Q8NHU6 1098 aaKnown RBP22.92■■□□□ 1.26
CLN6-214ENST00000636314 FAM84BQ96KN1 310 aaPredicted RBP22.92■■□□□ 1.26
CLN6-214ENST00000636314 FZD1Q9UP38 647 aa22.92■■□□□ 1.26
CLN6-214ENST00000636314 COL1A1P02452 1464 aaPredicted RBP22.92■■□□□ 1.26
CLN6-214ENST00000636314 FAM205AQ6ZU69 1335 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 F8W031 263 aaPredicted RBP22.91■■□□□ 1.26
CLN6-214ENST00000636314 PUM3Q15397 648 aaKnown RBP22.91■■□□□ 1.26
CLN6-214ENST00000636314 DLGAP5Q15398 846 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 CAVIN4Q5BKX8 364 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 SPRYD7Q5W111 196 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 CLUAP1Q96AJ1 413 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 ZBED3Q96IU2 234 aaPredicted RBP22.91■■□□□ 1.26
CLN6-214ENST00000636314 R3HDMLQ9H3Y0 253 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 TNNQ9UQP3 1299 aa22.91■■□□□ 1.26
CLN6-214ENST00000636314 MYH13Q9UKX3 1938 aa22.9■■□□□ 1.26
CLN6-214ENST00000636314 LDLRAD1Q5T700 205 aa22.9■■□□□ 1.26
CLN6-214ENST00000636314 SIL1Q9H173 461 aa22.9■■□□□ 1.26
CLN6-214ENST00000636314 FBXO3Q9UK99 471 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms