RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 JDP2Q8WYK2 163 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 ZC3H12CQ9C0D7 883 aaKnown RBP18.62■□□□□ 0.57
CLN8-209ENST00000635970 IRS2Q9Y4H2 1338 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 ZNF646O15015 1829 aaPredicted RBP18.61■□□□□ 0.57
CLN8-209ENST00000635970 PSME4Q14997 1843 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
CLN8-209ENST00000635970 NIM1KQ8IY84 436 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 FBXO3Q9UK99 471 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 ZNF541Q9H0D2 1346 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
CLN8-209ENST00000635970 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 VPS33BQ9H267 617 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
CLN8-209ENST00000635970 YDJCA8MPS7 323 aa18.6■□□□□ 0.57
CLN8-209ENST00000635970 ST18O60284 1047 aa18.6■□□□□ 0.57
CLN8-209ENST00000635970 GSPT1P15170 499 aaKnown RBP18.6■□□□□ 0.57
CLN8-209ENST00000635970 FZD9O00144 591 aa18.59■□□□□ 0.57
CLN8-209ENST00000635970 TFCP2Q12800 502 aa18.59■□□□□ 0.57
CLN8-209ENST00000635970 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
CLN8-209ENST00000635970 ECE2O60344 883 aa18.59■□□□□ 0.57
CLN8-209ENST00000635970 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
CLN8-209ENST00000635970 G3BP1Q13283 466 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLN8-209ENST00000635970 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.59■□□□□ 0.57
CLN8-209ENST00000635970 CEP126Q9P2H0 1117 aa18.59■□□□□ 0.57
CLN8-209ENST00000635970 MYH13Q9UKX3 1938 aa18.58■□□□□ 0.57
CLN8-209ENST00000635970 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.56
CLN8-209ENST00000635970 SASH1O94885 1247 aa18.58■□□□□ 0.56
CLN8-209ENST00000635970 OS9Q13438 667 aaPredicted RBP18.58■□□□□ 0.56
CLN8-209ENST00000635970 UBE4AQ14139 1066 aa18.58■□□□□ 0.56
CLN8-209ENST00000635970 PUM3Q15397 648 aaKnown RBP18.58■□□□□ 0.56
CLN8-209ENST00000635970 KCNQ5Q9NR82 932 aa18.58■□□□□ 0.56
CLN8-209ENST00000635970 OFD1O75665 1012 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 REC8O95072 547 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 G3V3G9 751 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 HMMRO75330 724 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 FGFR2P21802 821 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 GYG1P46976 350 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
CLN8-209ENST00000635970 ZNF609O15014 1411 aa18.56■□□□□ 0.56
CLN8-209ENST00000635970 RAD17O75943 681 aa18.56■□□□□ 0.56
CLN8-209ENST00000635970 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
CLN8-209ENST00000635970 LMBRD1Q9NUN5 540 aa18.56■□□□□ 0.56
CLN8-209ENST00000635970 DDNO94850 711 aaPredicted RBP18.55■□□□□ 0.56
CLN8-209ENST00000635970 C15orf52Q6ZUT6 534 aaKnown RBP18.55■□□□□ 0.56
CLN8-209ENST00000635970 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
CLN8-209ENST00000635970 APBB1O00213 710 aa18.55■□□□□ 0.56
CLN8-209ENST00000635970 MCM5P33992 734 aa18.55■□□□□ 0.56
CLN8-209ENST00000635970 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
CLN8-209ENST00000635970 CXCL9Q07325 125 aa18.55■□□□□ 0.56
CLN8-209ENST00000635970 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
CLN8-209ENST00000635970 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
CLN8-209ENST00000635970 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
CLN8-209ENST00000635970 LPIN2Q92539 896 aa18.54■□□□□ 0.56
CLN8-209ENST00000635970 GJA3Q9Y6H8 435 aa18.54■□□□□ 0.56
CLN8-209ENST00000635970 IFIT1P09914 478 aaKnown RBP18.53■□□□□ 0.56
CLN8-209ENST00000635970 SLC5A1P13866 664 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 ADORA1P30542 326 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 MCM2P49736 904 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 TIMM10P62072 90 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 ZSCAN23Q3MJ62 389 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 PDLIM2Q96JY6 352 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 FAM84BQ96KN1 310 aaPredicted RBP18.53■□□□□ 0.56
CLN8-209ENST00000635970 COA1Q9GZY4 146 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 CD209Q9NNX6 404 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 ZNF804AQ7Z570 1209 aa18.53■□□□□ 0.56
CLN8-209ENST00000635970 NOL7Q9UMY1 257 aaKnown RBP18.53■□□□□ 0.56
CLN8-209ENST00000635970 ZNF500O60304 480 aaPredicted RBP18.52■□□□□ 0.56
CLN8-209ENST00000635970 BCAMP50895 628 aa18.52■□□□□ 0.56
CLN8-209ENST00000635970 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
CLN8-209ENST00000635970 ZNF784Q8NCA9 323 aaPredicted RBP18.52■□□□□ 0.56
CLN8-209ENST00000635970 IQSEC3Q9UPP2 1182 aaPredicted RBP18.52■□□□□ 0.56
CLN8-209ENST00000635970 PSMD14O00487 310 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 PODNQ7Z5L7 613 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
CLN8-209ENST00000635970 GPC2Q8N158 579 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 IL1RAPL2Q9NP60 686 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
CLN8-209ENST00000635970 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 CAVIN1Q6NZI2 390 aaKnown RBP18.5■□□□□ 0.55
CLN8-209ENST00000635970 FBXO33Q7Z6M2 555 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 MAP7D2Q96T17 732 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 NMRK2Q9NPI5 230 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
CLN8-209ENST00000635970 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 SCN4AP35499 1836 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 MBD3O95983 291 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 IL1R1P14778 569 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 SDSP20132 328 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms