RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
C11orf53-202ENST00000635886 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 ADM5C9JUS6 153 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
C11orf53-202ENST00000635886 SLC5A1P13866 664 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 BCAMP50895 628 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 FKBP1AP62942 108 aaKnown RBP16.71■□□□□ 0.27
C11orf53-202ENST00000635886 CAVIN4Q5BKX8 364 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
C11orf53-202ENST00000635886 LPIN2Q92539 896 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
C11orf53-202ENST00000635886 IQSEC3Q9UPP2 1182 aaPredicted RBP16.71■□□□□ 0.27
C11orf53-202ENST00000635886 F8W031 263 aaPredicted RBP16.7■□□□□ 0.26
C11orf53-202ENST00000635886 CELF2O95319 508 aaKnown RBP16.7■□□□□ 0.26
C11orf53-202ENST00000635886 MMP14P50281 582 aa16.7■□□□□ 0.26
C11orf53-202ENST00000635886 ATP2B3Q16720 1220 aa16.7■□□□□ 0.26
C11orf53-202ENST00000635886 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
C11orf53-202ENST00000635886 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
C11orf53-202ENST00000635886 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 WNT10BO00744 389 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 MFSD14BQ5SR56 506 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 TRPM7Q96QT4 1865 aa16.69■□□□□ 0.26
C11orf53-202ENST00000635886 MS4A1P11836 297 aa16.68■□□□□ 0.26
C11orf53-202ENST00000635886 CHAF1AQ13111 956 aaPredicted RBP16.68■□□□□ 0.26
C11orf53-202ENST00000635886 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
C11orf53-202ENST00000635886 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
C11orf53-202ENST00000635886 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
C11orf53-202ENST00000635886 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
C11orf53-202ENST00000635886 TFCP2Q12800 502 aa16.67■□□□□ 0.26
C11orf53-202ENST00000635886 POLA2Q14181 598 aa16.67■□□□□ 0.26
C11orf53-202ENST00000635886 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
C11orf53-202ENST00000635886 SCAF8Q9UPN6 1271 aaKnown RBP16.67■□□□□ 0.26
C11orf53-202ENST00000635886 PITPNM2Q9BZ72 1349 aa16.67■□□□□ 0.26
C11orf53-202ENST00000635886 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 GRIK5Q16478 980 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 DEFB115Q30KQ5 88 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
C11orf53-202ENST00000635886 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 TLL2Q9Y6L7 1015 aa16.66■□□□□ 0.26
C11orf53-202ENST00000635886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
C11orf53-202ENST00000635886 ADORA1P30542 326 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 VEGFBP49765 207 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
C11orf53-202ENST00000635886 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
C11orf53-202ENST00000635886 CFAP100Q494V2 611 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
C11orf53-202ENST00000635886 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
C11orf53-202ENST00000635886 TIMM10P62072 90 aa16.64■□□□□ 0.25
C11orf53-202ENST00000635886 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
C11orf53-202ENST00000635886 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
C11orf53-202ENST00000635886 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
C11orf53-202ENST00000635886 ARAP2Q8WZ64 1704 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 A0A1B0GUL7 405 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 PHKA1P46020 1223 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
C11orf53-202ENST00000635886 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
C11orf53-202ENST00000635886 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 AOX1Q06278 1338 aa16.63■□□□□ 0.25
C11orf53-202ENST00000635886 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
C11orf53-202ENST00000635886 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 PAXIP1Q6ZW49 1069 aaPredicted RBP16.62■□□□□ 0.25
C11orf53-202ENST00000635886 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 GBA2Q9HCG7 927 aaPredicted RBP16.62■□□□□ 0.25
C11orf53-202ENST00000635886 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
C11orf53-202ENST00000635886 SERPINA10Q9UK55 444 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
C11orf53-202ENST00000635886 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
C11orf53-202ENST00000635886 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
C11orf53-202ENST00000635886 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
C11orf53-202ENST00000635886 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
C11orf53-202ENST00000635886 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
C11orf53-202ENST00000635886 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
C11orf53-202ENST00000635886 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
C11orf53-202ENST00000635886 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
C11orf53-202ENST00000635886 MYO1BO43795 1136 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 CRKP46108 304 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 HUNKP57058 714 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 GRM1Q13255 1194 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
C11orf53-202ENST00000635886 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 HHIPL1Q96JK4 782 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
C11orf53-202ENST00000635886 NOP58Q9Y2X3 529 aaKnown RBP16.6■□□□□ 0.25
C11orf53-202ENST00000635886 SEMA3EO15041 775 aa16.59■□□□□ 0.25
C11orf53-202ENST00000635886 ECE1P42892 770 aa16.59■□□□□ 0.25
C11orf53-202ENST00000635886 HDLBPQ00341 1268 aaKnown RBP16.59■□□□□ 0.25
C11orf53-202ENST00000635886 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms