RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 PDE12Q6L8Q7 609 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 Q6ZVU0 165 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 C3orf58Q8NDZ4 430 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 MRGPRX2Q96LB1 330 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 RNPC3Q96LT9 517 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 NLRP3Q96P20 1036 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 ELP3Q9H9T3 547 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 KLHL42Q9P2K6 505 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 XIRP1Q702N8 1843 aaKnown RBP6.48□□□□□ -1.37
CDRT1-208ENST00000630868 UBR1Q8IWV7 1749 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 MROH1Q8NDA8 1641 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 EREGO14944 169 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 GADD45BO75293 160 aaPredicted RBP6.48□□□□□ -1.37
CDRT1-208ENST00000630868 LTKP29376 864 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 ETFBP38117 255 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 ARSDP51689 593 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 IGBP1P78318 339 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
CDRT1-208ENST00000630868 C4orf17Q53FE4 359 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 LIAT1Q6ZQX7 453 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 ANKS3Q6ZW76 656 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 GALNT12Q8IXK2 581 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 NOC4LQ9BVI4 516 aaKnown RBP6.48□□□□□ -1.37
CDRT1-208ENST00000630868 SUV39H2Q9H5I1 410 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 GINM1Q9NU53 330 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
CDRT1-208ENST00000630868 MRVI1Q9Y6F6 885 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 ARHGAP31Q2M1Z3 1444 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 MAST1Q9Y2H9 1570 aa6.48□□□□□ -1.37
CDRT1-208ENST00000630868 EIF2AK4Q9P2K8 1649 aaKnown RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 WNT7AO00755 349 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 KLF4O43474 513 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 CD2BP2O95400 341 aaKnown RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 RASA3Q14644 834 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 NOL8Q76FK4 1167 aaKnown RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 CMTR1Q8N1G2 835 aaKnown RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 MKL1Q969V6 931 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 RSRP1Q9BUV0 290 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 ZNF395Q9H8N7 513 aaPredicted RBP6.47□□□□□ -1.37
CDRT1-208ENST00000630868 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 SNTG2Q9NY99 539 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 CNTN3Q9P232 1028 aa6.47□□□□□ -1.37
CDRT1-208ENST00000630868 TSPY4P0CV99 314 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 TSPY10P0CW01 314 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 ATP4AP20648 1035 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 GSTT1P30711 240 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 HIF1AQ16665 826 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 GNASQ5JWF2 1037 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 C1orf127Q8N9H9 656 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 SRPK1Q96SB4 655 aaKnown RBP6.46□□□□□ -1.38
CDRT1-208ENST00000630868 KLF16Q9BXK1 252 aaPredicted RBP6.46□□□□□ -1.38
CDRT1-208ENST00000630868 ZDHHC3Q9NYG2 299 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 COL4A3BPQ9Y5P4 624 aa6.46□□□□□ -1.38
CDRT1-208ENST00000630868 MAP3K1Q13233 1512 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 FAM221BA6H8Z2 402 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 MINDY4BA8MYZ0 360 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 ZIC2O95409 532 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 ITGBL1O95965 494 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 GGCXP38435 758 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 EIF4A3P38919 411 aaKnown RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 SOX9P48436 509 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 VEGFBP49765 207 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 KCNC4Q03721 635 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 RAB33AQ14088 237 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 NBPF1Q3BBV0 1214 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 RNF187Q5TA31 235 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 NBPF10Q6P3W6 841 aaKnown RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 BTLAQ7Z6A9 289 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 FILIP1Q7Z7B0 1213 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 AIDAQ96BJ3 306 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 RHOVQ96L33 236 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 TMEM74Q96NL1 305 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 BRINP2Q9C0B6 783 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 GRIP2Q9C0E4 1043 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 KANSL2Q9H9L4 492 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 LATS2Q9NRM7 1088 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
CDRT1-208ENST00000630868 FNDC3AQ9Y2H6 1198 aaKnown RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 NOP58Q9Y2X3 529 aaKnown RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-208ENST00000630868 TMEM94Q12767 1356 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 TMEM2Q9UHN6 1383 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 FBXO24O75426 580 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 ALDH1A1P00352 501 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 GTF2E1P29083 439 aaPredicted RBP6.44□□□□□ -1.38
CDRT1-208ENST00000630868 GBP2P32456 591 aaPredicted RBP6.44□□□□□ -1.38
CDRT1-208ENST00000630868 CTC1Q2NKJ3 1217 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 ZNF296Q8WUU4 475 aaPredicted RBP6.44□□□□□ -1.38
CDRT1-208ENST00000630868 DEPDC7Q96QD5 511 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 TRIM55Q9BYV6 548 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 LRRC9Q6ZRR7 1453 aa6.44□□□□□ -1.38
CDRT1-208ENST00000630868 TET3O43151 1660 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms