RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 FKBP1AP62942 108 aaKnown RBP20.02■□□□□ 0.8
PNKP-222ENST00000629088 PRKG1Q13976 671 aa20.02■□□□□ 0.8
PNKP-222ENST00000629088 PKN2Q16513 984 aaKnown RBP20.02■□□□□ 0.8
PNKP-222ENST00000629088 APOBEC3FQ8IUX4 373 aaKnown RBP20.02■□□□□ 0.8
PNKP-222ENST00000629088 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
PNKP-222ENST00000629088 COL1A1P02452 1464 aaPredicted RBP20.02■□□□□ 0.8
PNKP-222ENST00000629088 GPR25O00155 361 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 TAF5LO75529 589 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 EPHA10Q5JZY3 1008 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 UTYO14607 1347 aa20.01■□□□□ 0.79
PNKP-222ENST00000629088 ARMC9Q7Z3E5 817 aa20■□□□□ 0.79
PNKP-222ENST00000629088 HELBQ8NG08 1087 aaPredicted RBP20■□□□□ 0.79
PNKP-222ENST00000629088 LDLRAD1Q5T700 205 aa19.99■□□□□ 0.79
PNKP-222ENST00000629088 SLC4A10Q6U841 1118 aa19.99■□□□□ 0.79
PNKP-222ENST00000629088 R3HDMLQ9H3Y0 253 aa19.99■□□□□ 0.79
PNKP-222ENST00000629088 CNNM1Q9NRU3 951 aa19.99■□□□□ 0.79
PNKP-222ENST00000629088 E9PSI1 815 aa19.98■□□□□ 0.79
PNKP-222ENST00000629088 SNAP23O00161 211 aa19.98■□□□□ 0.79
PNKP-222ENST00000629088 SREBF2Q12772 1141 aa19.98■□□□□ 0.79
PNKP-222ENST00000629088 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
PNKP-222ENST00000629088 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
PNKP-222ENST00000629088 PTPRCP08575 1304 aa19.98■□□□□ 0.79
PNKP-222ENST00000629088 UBE4AQ14139 1066 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 SPRYD7Q5W111 196 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 CERS5Q8N5B7 392 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 ZNF594Q96JF6 807 aaPredicted RBP19.97■□□□□ 0.79
PNKP-222ENST00000629088 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 ANGEL1Q9UNK9 670 aaKnown RBP19.97■□□□□ 0.79
PNKP-222ENST00000629088 PPP2R3BQ9Y5P8 575 aa19.97■□□□□ 0.79
PNKP-222ENST00000629088 RABL6Q3YEC7 729 aaPredicted RBP19.96■□□□□ 0.79
PNKP-222ENST00000629088 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
PNKP-222ENST00000629088 KAZALD1Q96I82 304 aa19.96■□□□□ 0.79
PNKP-222ENST00000629088 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
PNKP-222ENST00000629088 CFHR5Q9BXR6 569 aa19.96■□□□□ 0.79
PNKP-222ENST00000629088 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
PNKP-222ENST00000629088 MYO1BO43795 1136 aa19.95■□□□□ 0.78
PNKP-222ENST00000629088 FKTNO75072 461 aa19.95■□□□□ 0.78
PNKP-222ENST00000629088 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
PNKP-222ENST00000629088 FBXO46Q6PJ61 603 aaPredicted RBP19.95■□□□□ 0.78
PNKP-222ENST00000629088 PCDHAC2Q9Y5I4 1007 aa19.95■□□□□ 0.78
PNKP-222ENST00000629088 PRPF38BQ5VTL8 546 aaKnown RBP19.94■□□□□ 0.78
PNKP-222ENST00000629088 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.94■□□□□ 0.78
PNKP-222ENST00000629088 PCDH10Q9P2E7 1040 aa19.94■□□□□ 0.78
PNKP-222ENST00000629088 ECM29Q5VYK3 1845 aa19.94■□□□□ 0.78
PNKP-222ENST00000629088 MROH5Q6ZUA9 1318 aa19.94■□□□□ 0.78
PNKP-222ENST00000629088 SPDYE2BA6NHP3 402 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 UNCXA6NJT0 531 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 PLIN1O60240 522 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 SPDYE6P0CI01 402 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 TDRD7Q8NHU6 1098 aaKnown RBP19.93■□□□□ 0.78
PNKP-222ENST00000629088 SLC10A4Q96EP9 437 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 RIPOR2Q9Y4F9 1068 aa19.93■□□□□ 0.78
PNKP-222ENST00000629088 F8W031 263 aaPredicted RBP19.92■□□□□ 0.78
PNKP-222ENST00000629088 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
PNKP-222ENST00000629088 MAP3K11Q16584 847 aa19.92■□□□□ 0.78
PNKP-222ENST00000629088 CFAP100Q494V2 611 aa19.92■□□□□ 0.78
PNKP-222ENST00000629088 CLMNQ96JQ2 1002 aa19.92■□□□□ 0.78
PNKP-222ENST00000629088 BICC1Q9H694 974 aaKnown RBP19.92■□□□□ 0.78
PNKP-222ENST00000629088 ALDH1A1P00352 501 aa19.91■□□□□ 0.78
PNKP-222ENST00000629088 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
PNKP-222ENST00000629088 ALDH1L2Q3SY69 923 aa19.91■□□□□ 0.78
PNKP-222ENST00000629088 CLRN2A0PK11 232 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 MANSC4A6NHS7 340 aaPredicted RBP19.9■□□□□ 0.78
PNKP-222ENST00000629088 PPP1R12BO60237 982 aaPredicted RBP19.9■□□□□ 0.78
PNKP-222ENST00000629088 INHBEP58166 350 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 IFNL1Q8IU54 200 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 ANKRD44Q8N8A2 993 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 SSH1Q8WYL5 1049 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 WNK4Q96J92 1243 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 FAM84BQ96KN1 310 aaPredicted RBP19.9■□□□□ 0.78
PNKP-222ENST00000629088 PRMT6Q96LA8 375 aaPredicted RBP19.9■□□□□ 0.78
PNKP-222ENST00000629088 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
PNKP-222ENST00000629088 SERPINA10Q9UK55 444 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 JAG2Q9Y219 1238 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 AOX1Q06278 1338 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 SSC5DA1L4H1 1573 aa19.9■□□□□ 0.78
PNKP-222ENST00000629088 HTTP42858 3142 aa19.89■□□□□ 0.77
PNKP-222ENST00000629088 SUPT20HL1Q3ZLR7 823 aa19.89■□□□□ 0.77
PNKP-222ENST00000629088 MFSD14BQ5SR56 506 aa19.89■□□□□ 0.77
PNKP-222ENST00000629088 ARAP2Q8WZ64 1704 aa19.89■□□□□ 0.77
PNKP-222ENST00000629088 IGF2BP3O00425 579 aaKnown RBP eCLIP19.88■□□□□ 0.77
PNKP-222ENST00000629088 ZBTB48P10074 688 aaPredicted RBP19.88■□□□□ 0.77
PNKP-222ENST00000629088 GYG1P46976 350 aa19.88■□□□□ 0.77
PNKP-222ENST00000629088 TNFAIP1Q13829 316 aa19.88■□□□□ 0.77
PNKP-222ENST00000629088 NBPF12Q5TAG4 269 aaPredicted RBP19.88■□□□□ 0.77
PNKP-222ENST00000629088 VEZTQ9HBM0 779 aa19.88■□□□□ 0.77
PNKP-222ENST00000629088 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
PNKP-222ENST00000629088 CT47B1P0C2W7 299 aaPredicted RBP19.87■□□□□ 0.77
PNKP-222ENST00000629088 FBXO33Q7Z6M2 555 aa19.87■□□□□ 0.77
PNKP-222ENST00000629088 VGLL2Q8N8G2 317 aa19.87■□□□□ 0.77
PNKP-222ENST00000629088 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
PNKP-222ENST00000629088 TRIM17Q9Y577 477 aa19.87■□□□□ 0.77
PNKP-222ENST00000629088 USP2O75604 605 aaPredicted RBP19.86■□□□□ 0.77
PNKP-222ENST00000629088 PDE8BO95263 885 aa19.86■□□□□ 0.77
PNKP-222ENST00000629088 GJA5P36382 358 aa19.86■□□□□ 0.77
PNKP-222ENST00000629088 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms