RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 SLC5A1P13866 664 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 KLRK1P26718 216 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 PRELPP51888 382 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
SOX2-OT-249ENST00000628810 SBF1O95248 1867 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 DICER1Q9UPY3 1922 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 PSME4Q14997 1843 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 APBB1O00213 710 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 RASSF7Q02833 373 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 GPR162Q16538 588 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 FBXO33Q7Z6M2 555 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-249ENST00000628810 UTRNP46939 3433 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 LMNB1P20700 586 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 ADORA1P30542 326 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 TIMM10P62072 90 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 ARHGAP27Q6ZUM4 889 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 AACSQ86V21 672 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 XAGE2Q96GT9 111 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 ZNF512BQ96KM6 892 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 GPR101Q96P66 508 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 TLR7Q9NYK1 1049 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-249ENST00000628810 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 IL1R1P14778 569 aa12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 AOC3Q16853 763 aa12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 COA1Q9GZY4 146 aa12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 PDS5AQ29RF7 1337 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-249ENST00000628810 SEMA3EO15041 775 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 HIBADHP31937 336 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 PHKA1P46020 1223 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 GYG1P46976 350 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 NEUROD6Q96NK8 337 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 LNPKQ9C0E8 428 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 CD209Q9NNX6 404 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-249ENST00000628810 MYH13Q9UKX3 1938 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 BCAMP50895 628 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 LARGE2Q8N3Y3 721 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 STAP2Q9UGK3 403 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 AOX1Q06278 1338 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
SOX2-OT-249ENST00000628810 SCN9AQ15858 1988 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 ECE2O60344 883 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 MX1P20591 662 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 PDE4AP27815 886 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 CCDC158Q5M9N0 1113 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 NIM1KQ8IY84 436 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 ZNRF3Q9ULT6 936 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
SOX2-OT-249ENST00000628810 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 FZD9O00144 591 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 ATP5JP18859 108 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 PDE1AP54750 535 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 GORABQ5T7V8 394 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 DBNDD1Q9H9R9 158 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
SOX2-OT-249ENST00000628810 DOCK2Q92608 1830 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms