RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 UBE2OQ9C0C9 1292 aaKnown RBP9.53□□□□□ -0.88
TCF4-266ENST00000628689 LRRC37AA6NMS7 1700 aa9.53□□□□□ -0.88
TCF4-266ENST00000628689 DDX60Q8IY21 1712 aaKnown RBP9.53□□□□□ -0.88
TCF4-266ENST00000628689 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.88
TCF4-266ENST00000628689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
TCF4-266ENST00000628689 GNRH1P01148 92 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 SYN1P17600 705 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 GRK4P32298 578 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 MYO9BQ13459 2157 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 C7orf61Q8IZ16 206 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 TBC1D16Q8TBP0 767 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
TCF4-266ENST00000628689 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
TCF4-266ENST00000628689 ZC3H12CQ9C0D7 883 aaKnown RBP9.52□□□□□ -0.89
TCF4-266ENST00000628689 CTGFP29279 349 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 KIF22Q14807 665 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 PARP10Q53GL7 1025 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
TCF4-266ENST00000628689 KIF6Q6ZMV9 814 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 BRI3BPQ8WY22 251 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 PAWRQ96IZ0 340 aaKnown RBP9.51□□□□□ -0.89
TCF4-266ENST00000628689 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
TCF4-266ENST00000628689 SRRDQ9UH36 339 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 RIPOR2Q9Y4F9 1068 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 PSME4Q14997 1843 aa9.51□□□□□ -0.89
TCF4-266ENST00000628689 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 G3V3G9 751 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 SASH1O94885 1247 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 TFRCP02786 760 aaKnown RBP9.5□□□□□ -0.89
TCF4-266ENST00000628689 MORC1Q86VD1 984 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 CELF1Q92879 486 aaKnown RBP9.5□□□□□ -0.89
TCF4-266ENST00000628689 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
TCF4-266ENST00000628689 BIN2Q9UBW5 565 aaPredicted RBP9.5□□□□□ -0.89
TCF4-266ENST00000628689 RRP7AQ9Y3A4 280 aaKnown RBP9.5□□□□□ -0.89
TCF4-266ENST00000628689 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
TCF4-266ENST00000628689 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
TCF4-266ENST00000628689 TLR2O60603 784 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 ASTLQ6HA08 431 aaPredicted RBP9.49□□□□□ -0.89
TCF4-266ENST00000628689 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
TCF4-266ENST00000628689 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 RAET1EQ8TD07 263 aa9.49□□□□□ -0.89
TCF4-266ENST00000628689 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 USP2O75604 605 aaPredicted RBP9.48□□□□□ -0.89
TCF4-266ENST00000628689 OSBPP22059 807 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 UBXN2AP68543 259 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 ALYREFQ86V81 257 aaKnown RBP9.48□□□□□ -0.89
TCF4-266ENST00000628689 DIS3LQ8TF46 1054 aaKnown RBP9.48□□□□□ -0.89
TCF4-266ENST00000628689 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 MXD3Q9BW11 206 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
TCF4-266ENST00000628689 CCL15-CCL14A0A0B4J2E2 113 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 STK25O00506 426 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
TCF4-266ENST00000628689 MYL6BP14649 208 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 HOXD10P28358 340 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 PSMC4P43686 418 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 CCL15Q16663 113 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 NECAB2Q7Z6G3 386 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 OPTNQ96CV9 577 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 DEFB118Q96PH6 123 aa9.47□□□□□ -0.89
TCF4-266ENST00000628689 COL4A1P02462 1669 aa9.46□□□□□ -0.89
TCF4-266ENST00000628689 CAPN2P17655 700 aa9.46□□□□□ -0.9
TCF4-266ENST00000628689 ANKRD13AQ8IZ07 590 aa9.46□□□□□ -0.9
TCF4-266ENST00000628689 ZBED3Q96IU2 234 aaPredicted RBP9.46□□□□□ -0.9
TCF4-266ENST00000628689 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
TCF4-266ENST00000628689 ELP3Q9H9T3 547 aa9.46□□□□□ -0.9
TCF4-266ENST00000628689 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
TCF4-266ENST00000628689 COL2A1P02458 1487 aaPredicted RBP9.46□□□□□ -0.9
TCF4-266ENST00000628689 CACNA1GO43497 2377 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 UFL1O94874 794 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
TCF4-266ENST00000628689 DACT2Q5SW24 774 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
TCF4-266ENST00000628689 C17orf99Q6UX52 265 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 MYPNQ86TC9 1320 aa9.45□□□□□ -0.9
TCF4-266ENST00000628689 WDHD1O75717 1129 aaPredicted RBP9.44□□□□□ -0.9
TCF4-266ENST00000628689 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
TCF4-266ENST00000628689 FOSL2P15408 326 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 GTF2A2P52657 109 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
TCF4-266ENST00000628689 SF3B3Q15393 1217 aaKnown RBP9.44□□□□□ -0.9
TCF4-266ENST00000628689 SUPT20HL1Q3ZLR7 823 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
TCF4-266ENST00000628689 TRMT112Q9UI30 125 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms