RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 KLHDC4Q8TBB5 520 aa21.52■■□□□ 1.04
SPTAN1-214ENST00000628614 FAM84BQ96KN1 310 aaPredicted RBP21.52■■□□□ 1.04
SPTAN1-214ENST00000628614 PRDM10Q9NQV6 1147 aa21.52■■□□□ 1.04
SPTAN1-214ENST00000628614 PDE8BO95263 885 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 GYG1P46976 350 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 NOGQ13253 232 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 RGMBQ6NW40 437 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 APOBEC3FQ8IUX4 373 aaKnown RBP21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 TNS4Q8IZW8 715 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 VGLL2Q8N8G2 317 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 TDRD7Q8NHU6 1098 aaKnown RBP21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 ZBED3Q96IU2 234 aaPredicted RBP21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 FAM205AQ6ZU69 1335 aa21.51■■□□□ 1.03
SPTAN1-214ENST00000628614 IPO8O15397 1037 aaKnown RBP21.5■■□□□ 1.03
SPTAN1-214ENST00000628614 FKBP1BP68106 108 aa21.5■■□□□ 1.03
SPTAN1-214ENST00000628614 DLGAP5Q15398 846 aa21.5■■□□□ 1.03
SPTAN1-214ENST00000628614 VPS37DQ86XT2 251 aa21.5■■□□□ 1.03
SPTAN1-214ENST00000628614 MTMR14Q8NCE2 650 aa21.5■■□□□ 1.03
SPTAN1-214ENST00000628614 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
SPTAN1-214ENST00000628614 CAVIN4Q5BKX8 364 aa21.49■■□□□ 1.03
SPTAN1-214ENST00000628614 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
SPTAN1-214ENST00000628614 JAG2Q9Y219 1238 aa21.49■■□□□ 1.03
SPTAN1-214ENST00000628614 F8W031 263 aaPredicted RBP21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 EYA2O00167 538 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 PTPN12Q05209 780 aaKnown RBP21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 PUM3Q15397 648 aaKnown RBP21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 FBXO33Q7Z6M2 555 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 CCDC102AQ96A19 550 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 FBXO3Q9UK99 471 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 SCAF8Q9UPN6 1271 aaKnown RBP21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 LRRFIP2Q9Y608 721 aaKnown RBP21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 PAPPA2Q9BXP8 1791 aa21.48■■□□□ 1.03
SPTAN1-214ENST00000628614 HSPA8P11142 646 aaKnown RBP21.47■■□□□ 1.03
SPTAN1-214ENST00000628614 NF2P35240 595 aa21.47■■□□□ 1.03
SPTAN1-214ENST00000628614 ZNF157P51786 506 aaPredicted RBP21.47■■□□□ 1.03
SPTAN1-214ENST00000628614 LBX1P52954 281 aa21.47■■□□□ 1.03
SPTAN1-214ENST00000628614 MEIS3Q99687 375 aa21.47■■□□□ 1.03
SPTAN1-214ENST00000628614 COL1A1P02452 1464 aaPredicted RBP21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 CA12O43570 354 aa21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 MYO1BO43795 1136 aa21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 GNAI3P08754 354 aa21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 IFIT1P09914 478 aaKnown RBP21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 CFAP100Q494V2 611 aa21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 ATF7IPQ6VMQ6 1270 aa21.46■■□□□ 1.03
SPTAN1-214ENST00000628614 SPDYE2BA6NHP3 402 aa21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 FAM155AB1AL88 458 aaPredicted RBP21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 FRAT2O75474 233 aaPredicted RBP21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 BCAR3O75815 825 aa21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 SPDYE6P0CI01 402 aa21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 TRIM27P14373 513 aa21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 FGFR2P21802 821 aa21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
SPTAN1-214ENST00000628614 CIAO1O76071 339 aa21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 SLC5A1P13866 664 aa21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 RBM5P52756 815 aaKnown RBP eCLIP21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 PRAMEF18Q5VWM3 479 aa21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 ATG9AQ7Z3C6 839 aa21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 LPIN2Q92539 896 aa21.44■■□□□ 1.02
SPTAN1-214ENST00000628614 ARAP2Q8WZ64 1704 aa21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 SLC10A3P09131 477 aa21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 TBC1D22AQ8WUA7 517 aa21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 SIL1Q9H173 461 aa21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 SERPINA10Q9UK55 444 aa21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 TTF2Q9UNY4 1162 aaKnown RBP21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 IQSEC3Q9UPP2 1182 aaPredicted RBP21.43■■□□□ 1.02
SPTAN1-214ENST00000628614 BCAMP50895 628 aa21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 CHAF1AQ13111 956 aaPredicted RBP21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 TTLL12Q14166 644 aaPredicted RBP21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 DEFB129Q9H1M3 183 aa21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 PCDHAC2Q9Y5I4 1007 aa21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 PPP2R3BQ9Y5P8 575 aa21.42■■□□□ 1.02
SPTAN1-214ENST00000628614 IL15P40933 162 aaPredicted RBP21.41■■□□□ 1.02
SPTAN1-214ENST00000628614 PRMT6Q96LA8 375 aaPredicted RBP21.41■■□□□ 1.02
SPTAN1-214ENST00000628614 ZIC5Q96T25 663 aa21.41■■□□□ 1.02
SPTAN1-214ENST00000628614 CEP126Q9P2H0 1117 aa21.41■■□□□ 1.02
SPTAN1-214ENST00000628614 ECM29Q5VYK3 1845 aa21.41■■□□□ 1.02
SPTAN1-214ENST00000628614 CLRN2A0PK11 232 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 ZKSCAN2Q63HK3 967 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 MOB2Q70IA6 237 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 RASAL3Q86YV0 1011 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 VEZTQ9HBM0 779 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 COPRSQ9NQ92 184 aa21.4■■□□□ 1.02
SPTAN1-214ENST00000628614 UBE2Q2LH0YL09 131 aa21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 KIF23Q02241 960 aaPredicted RBP21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 MTX1Q13505 466 aa21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 CLUAP1Q96AJ1 413 aa21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.01
SPTAN1-214ENST00000628614 SRGAP3O43295 1099 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 HDLBPQ00341 1268 aaKnown RBP21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 TNFAIP1Q13829 316 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 REM2Q8IYK8 340 aaPredicted RBP21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 TSKSQ9UJT2 592 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 TNNQ9UQP3 1299 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 SUGT1Q9Y2Z0 365 aa21.38■■□□□ 1.01
SPTAN1-214ENST00000628614 GNAI2P04899 355 aa21.37■■□□□ 1.01
SPTAN1-214ENST00000628614 CRKP46108 304 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms