RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 PAPPA2Q9BXP8 1791 aa15.22■□□□□ 0.03
UBR1-212ENST00000627960 CAPN15O75808 1086 aa15.22■□□□□ 0.03
UBR1-212ENST00000627960 FKBP1BP68106 108 aa15.22■□□□□ 0.03
UBR1-212ENST00000627960 CA12O43570 354 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 HIBADHP31937 336 aaKnown RBP15.21■□□□□ 0.03
UBR1-212ENST00000627960 GYG1P46976 350 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 LRRC24Q50LG9 513 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 MTMR14Q8NCE2 650 aa15.21■□□□□ 0.03
UBR1-212ENST00000627960 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
UBR1-212ENST00000627960 FAM84BQ96KN1 310 aaPredicted RBP15.21■□□□□ 0.03
UBR1-212ENST00000627960 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
UBR1-212ENST00000627960 AKAP11Q9UKA4 1901 aa15.21■□□□□ 0.02
UBR1-212ENST00000627960 FAM205AQ6ZU69 1335 aa15.2■□□□□ 0.02
UBR1-212ENST00000627960 SLC10A3P09131 477 aa15.2■□□□□ 0.02
UBR1-212ENST00000627960 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
UBR1-212ENST00000627960 APOBEC3FQ8IUX4 373 aaKnown RBP15.2■□□□□ 0.02
UBR1-212ENST00000627960 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
UBR1-212ENST00000627960 JAG2Q9Y219 1238 aa15.2■□□□□ 0.02
UBR1-212ENST00000627960 CASP8AP2Q9UKL3 1982 aa15.2■□□□□ 0.02
UBR1-212ENST00000627960 F8W031 263 aaPredicted RBP15.19■□□□□ 0.02
UBR1-212ENST00000627960 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
UBR1-212ENST00000627960 MOB2Q70IA6 237 aa15.19■□□□□ 0.02
UBR1-212ENST00000627960 KLHDC4Q8TBB5 520 aa15.19■□□□□ 0.02
UBR1-212ENST00000627960 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
UBR1-212ENST00000627960 UBE2Q2LH0YL09 131 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 PDE8BO95263 885 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 NF2P35240 595 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
UBR1-212ENST00000627960 RARSP54136 660 aaKnown RBP15.18■□□□□ 0.02
UBR1-212ENST00000627960 CFAP100Q494V2 611 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 FBXO33Q7Z6M2 555 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 PCDHAC2Q9Y5I4 1007 aa15.18■□□□□ 0.02
UBR1-212ENST00000627960 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
UBR1-212ENST00000627960 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
UBR1-212ENST00000627960 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
UBR1-212ENST00000627960 PRMT6Q96LA8 375 aaPredicted RBP15.17■□□□□ 0.02
UBR1-212ENST00000627960 COL1A1P02452 1464 aaPredicted RBP15.16■□□□□ 0.02
UBR1-212ENST00000627960 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 EYA2O00167 538 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 MYO1BO43795 1136 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
UBR1-212ENST00000627960 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
UBR1-212ENST00000627960 CAVIN4Q5BKX8 364 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 MFSD14BQ5SR56 506 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
UBR1-212ENST00000627960 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 CSRNP1Q96S65 589 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 DEFB129Q9H1M3 183 aa15.16■□□□□ 0.02
UBR1-212ENST00000627960 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
UBR1-212ENST00000627960 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
UBR1-212ENST00000627960 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
UBR1-212ENST00000627960 PPP2R3BQ9Y5P8 575 aa15.15■□□□□ 0.02
UBR1-212ENST00000627960 AOX1Q06278 1338 aa15.15■□□□□ 0.02
UBR1-212ENST00000627960 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 FGFR2P21802 821 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 RBM5P52756 815 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBR1-212ENST00000627960 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
UBR1-212ENST00000627960 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 MIER1Q8N108 512 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 RNF186Q9NXI6 227 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 SERPINA10Q9UK55 444 aa15.14■□□□□ 0.01
UBR1-212ENST00000627960 IQSEC3Q9UPP2 1182 aaPredicted RBP15.14■□□□□ 0.01
UBR1-212ENST00000627960 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 BCAMP50895 628 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
UBR1-212ENST00000627960 PRKG1Q13976 671 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 INTS3Q68E01 1043 aaKnown RBP15.13■□□□□ 0.01
UBR1-212ENST00000627960 ATG9AQ7Z3C6 839 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 VEZTQ9HBM0 779 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
UBR1-212ENST00000627960 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
UBR1-212ENST00000627960 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
UBR1-212ENST00000627960 TRPA1O75762 1119 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 CIAO1O76071 339 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 IFIT1P09914 478 aaKnown RBP15.12■□□□□ 0.01
UBR1-212ENST00000627960 CRKP46108 304 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 LDLRAD1Q5T700 205 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
UBR1-212ENST00000627960 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 ABHD8Q96I13 439 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 MEIS3Q99687 375 aa15.12■□□□□ 0.01
UBR1-212ENST00000627960 ZNF70Q9UC06 446 aaPredicted RBP15.12■□□□□ 0.01
UBR1-212ENST00000627960 ANGEL1Q9UNK9 670 aaKnown RBP15.12■□□□□ 0.01
UBR1-212ENST00000627960 IPO8O15397 1037 aaKnown RBP15.11■□□□□ 0.01
UBR1-212ENST00000627960 SLC5A1P13866 664 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 GRIK5Q16478 980 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 MAP3K11Q16584 847 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 SUPT20HL1Q3ZLR7 823 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
UBR1-212ENST00000627960 LPIN2Q92539 896 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 SIL1Q9H173 461 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
UBR1-212ENST00000627960 SSC5DA1L4H1 1573 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms