RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 SIL1Q9H173 461 aa17.27■□□□□ 0.36
SOX2-OT-242ENST00000627501 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.36
SOX2-OT-242ENST00000627501 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SOX2-OT-242ENST00000627501 PA2G4Q9UQ80 394 aaKnown RBP17.27■□□□□ 0.36
SOX2-OT-242ENST00000627501 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 HUNKP57058 714 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
SOX2-OT-242ENST00000627501 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
SOX2-OT-242ENST00000627501 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
SOX2-OT-242ENST00000627501 PDE8BO95263 885 aa17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 BCAMP50895 628 aa17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 FZD1Q9UP38 647 aa17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 THSD7BQ9C0I4 1608 aa17.24■□□□□ 0.35
SOX2-OT-242ENST00000627501 TRPM7Q96QT4 1865 aa17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 EYA2O00167 538 aa17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 FGFR2P21802 821 aa17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 FBXO33Q7Z6M2 555 aa17.23■□□□□ 0.35
SOX2-OT-242ENST00000627501 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 CLRN2A0PK11 232 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 ECE1P42892 770 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 LBX1P52954 281 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 ARHGAP45Q92619 1136 aa17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
SOX2-OT-242ENST00000627501 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
SOX2-OT-242ENST00000627501 HSPA8P11142 646 aaKnown RBP17.21■□□□□ 0.35
SOX2-OT-242ENST00000627501 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.35
SOX2-OT-242ENST00000627501 C2orf69Q8N8R5 385 aa17.21■□□□□ 0.35
SOX2-OT-242ENST00000627501 PRMT6Q96LA8 375 aaPredicted RBP17.21■□□□□ 0.35
SOX2-OT-242ENST00000627501 RLBP1P12271 317 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 PRKG1Q13976 671 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 PUM3Q15397 648 aaKnown RBP17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 DLGAP5Q15398 846 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 HHIPL1Q96JK4 782 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
SOX2-OT-242ENST00000627501 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
SOX2-OT-242ENST00000627501 UBE2Q2LH0YL09 131 aa17.19■□□□□ 0.34
SOX2-OT-242ENST00000627501 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
SOX2-OT-242ENST00000627501 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
SOX2-OT-242ENST00000627501 SSC5DA1L4H1 1573 aa17.19■□□□□ 0.34
SOX2-OT-242ENST00000627501 ADORA1P30542 326 aa17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 CTCFP49711 727 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 ZNF157P51786 506 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 RBM5P52756 815 aaKnown RBP eCLIP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 CDAN1Q8IWY9 1227 aa17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 TTF2Q9UNY4 1162 aaKnown RBP17.18■□□□□ 0.34
SOX2-OT-242ENST00000627501 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 MTMR14Q8NCE2 650 aa17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 VEZTQ9HBM0 779 aa17.17■□□□□ 0.34
SOX2-OT-242ENST00000627501 PNMA6EA0A0J9YXQ4 647 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 CAPN15O75808 1086 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 CIAO1O76071 339 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 SLC10A3P09131 477 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 MAP2K2P36507 400 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 RASAL3Q86YV0 1011 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 TDRD3Q9H7E2 651 aaKnown RBP17.16■□□□□ 0.34
SOX2-OT-242ENST00000627501 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 GNAI3P08754 354 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 SLC5A1P13866 664 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 PHKA1P46020 1223 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 CACNB3P54284 484 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 NOGQ13253 232 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 APOBEC3FQ8IUX4 373 aaKnown RBP17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 LPIN2Q92539 896 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
SOX2-OT-242ENST00000627501 CRKP46108 304 aa17.14■□□□□ 0.33
SOX2-OT-242ENST00000627501 TFCP2Q12800 502 aa17.14■□□□□ 0.33
SOX2-OT-242ENST00000627501 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
SOX2-OT-242ENST00000627501 MTX1Q13505 466 aa17.14■□□□□ 0.33
SOX2-OT-242ENST00000627501 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
SOX2-OT-242ENST00000627501 ZNF70Q9UC06 446 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms