RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TMEM88BA6NKF7 163 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 FRAT2O75474 233 aaPredicted RBP20.76■□□□□ 0.91
UBE3D-208ENST00000626828 HTRA3P83110 453 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 SCARF1Q14162 830 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 POLA2Q14181 598 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 MVPQ14764 893 aaKnown RBP20.76■□□□□ 0.91
UBE3D-208ENST00000626828 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 SSH3Q8TE77 659 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
UBE3D-208ENST00000626828 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
UBE3D-208ENST00000626828 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
UBE3D-208ENST00000626828 CERS5Q8N5B7 392 aa20.74■□□□□ 0.91
UBE3D-208ENST00000626828 GLIS2Q9BZE0 524 aaPredicted RBP20.74■□□□□ 0.91
UBE3D-208ENST00000626828 C1orf115Q9H7X2 142 aa20.74■□□□□ 0.91
UBE3D-208ENST00000626828 TFCP2Q12800 502 aa20.73■□□□□ 0.91
UBE3D-208ENST00000626828 TBC1D22AQ8WUA7 517 aa20.73■□□□□ 0.91
UBE3D-208ENST00000626828 GNL3LQ9NVN8 582 aaKnown RBP20.73■□□□□ 0.91
UBE3D-208ENST00000626828 IQSEC3Q9UPP2 1182 aaPredicted RBP20.73■□□□□ 0.91
UBE3D-208ENST00000626828 JAG2Q9Y219 1238 aa20.73■□□□□ 0.91
UBE3D-208ENST00000626828 TRAF5O00463 557 aa20.72■□□□□ 0.91
UBE3D-208ENST00000626828 TIMM10P62072 90 aa20.72■□□□□ 0.91
UBE3D-208ENST00000626828 MFSD14BQ5SR56 506 aa20.72■□□□□ 0.91
UBE3D-208ENST00000626828 KRT26Q7Z3Y9 468 aa20.72■□□□□ 0.91
UBE3D-208ENST00000626828 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
UBE3D-208ENST00000626828 SULF1Q8IWU6 871 aa20.71■□□□□ 0.91
UBE3D-208ENST00000626828 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
UBE3D-208ENST00000626828 F8W031 263 aaPredicted RBP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 WNT10BO00744 389 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 FMR1Q06787 632 aaKnown RBP eCLIP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 DLGAP5Q15398 846 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 NBPF9Q3BBW0 867 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 ANGEL2Q5VTE6 544 aaKnown RBP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 CEP85Q6P2H3 762 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 RPAP2Q8IXW5 612 aaPredicted RBP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 MTMR14Q8NCE2 650 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 KLRG1Q96E93 195 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 GGA3Q9NZ52 723 aa20.7■□□□□ 0.9
UBE3D-208ENST00000626828 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
UBE3D-208ENST00000626828 ZNF646O15015 1829 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-208ENST00000626828 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-208ENST00000626828 CST9Q5W186 159 aa20.69■□□□□ 0.9
UBE3D-208ENST00000626828 NEUROD6Q96NK8 337 aa20.69■□□□□ 0.9
UBE3D-208ENST00000626828 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
UBE3D-208ENST00000626828 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
UBE3D-208ENST00000626828 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
UBE3D-208ENST00000626828 ZBTB22O15209 634 aa20.68■□□□□ 0.9
UBE3D-208ENST00000626828 CELF2O95319 508 aaKnown RBP20.68■□□□□ 0.9
UBE3D-208ENST00000626828 C20orf194Q5TEA3 1177 aa20.68■□□□□ 0.9
UBE3D-208ENST00000626828 WDR66Q8TBY9 1149 aa20.68■□□□□ 0.9
UBE3D-208ENST00000626828 ZBED3Q96IU2 234 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-208ENST00000626828 TTF2Q9UNY4 1162 aaKnown RBP20.68■□□□□ 0.9
UBE3D-208ENST00000626828 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-208ENST00000626828 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
UBE3D-208ENST00000626828 SEMA3EO15041 775 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 DEFB115Q30KQ5 88 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 XAGE2Q96GT9 111 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 MRIQ9BWK5 157 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 SUGT1Q9Y2Z0 365 aa20.67■□□□□ 0.9
UBE3D-208ENST00000626828 ADORA1P30542 326 aa20.66■□□□□ 0.9
UBE3D-208ENST00000626828 RBM5P52756 815 aaKnown RBP eCLIP20.66■□□□□ 0.9
UBE3D-208ENST00000626828 SERPINA10Q9UK55 444 aa20.66■□□□□ 0.9
UBE3D-208ENST00000626828 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
UBE3D-208ENST00000626828 MYO1BO43795 1136 aa20.65■□□□□ 0.9
UBE3D-208ENST00000626828 HMMRO75330 724 aa20.65■□□□□ 0.9
UBE3D-208ENST00000626828 PHKA1P46020 1223 aa20.65■□□□□ 0.9
UBE3D-208ENST00000626828 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
UBE3D-208ENST00000626828 GORABQ5T7V8 394 aa20.65■□□□□ 0.9
UBE3D-208ENST00000626828 ZNF408Q9H9D4 720 aa20.65■□□□□ 0.9
UBE3D-208ENST00000626828 MKRN1Q9UHC7 482 aaKnown RBP20.65■□□□□ 0.9
UBE3D-208ENST00000626828 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
UBE3D-208ENST00000626828 HSP90AB4PQ58FF6 505 aa20.64■□□□□ 0.89
UBE3D-208ENST00000626828 DLK2Q6UY11 383 aa20.64■□□□□ 0.89
UBE3D-208ENST00000626828 PRMT6Q96LA8 375 aaPredicted RBP20.64■□□□□ 0.89
UBE3D-208ENST00000626828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.64■□□□□ 0.89
UBE3D-208ENST00000626828 SPDYE2BA6NHP3 402 aa20.63■□□□□ 0.89
UBE3D-208ENST00000626828 RASSF10A6NK89 507 aa20.63■□□□□ 0.89
UBE3D-208ENST00000626828 SPDYE6P0CI01 402 aa20.63■□□□□ 0.89
UBE3D-208ENST00000626828 ERC1Q8IUD2 1116 aa20.63■□□□□ 0.89
UBE3D-208ENST00000626828 APOBEC3FQ8IUX4 373 aaKnown RBP20.63■□□□□ 0.89
UBE3D-208ENST00000626828 TLL2Q9Y6L7 1015 aa20.63■□□□□ 0.89
UBE3D-208ENST00000626828 GRIK5Q16478 980 aa20.62■□□□□ 0.89
UBE3D-208ENST00000626828 C2orf69Q8N8R5 385 aa20.62■□□□□ 0.89
UBE3D-208ENST00000626828 JMYQ8N9B5 988 aa20.62■□□□□ 0.89
UBE3D-208ENST00000626828 CDCA5Q96FF9 252 aa20.62■□□□□ 0.89
UBE3D-208ENST00000626828 CNTNAP1P78357 1384 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 MAST3O60307 1309 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 CRKP46108 304 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 TNNI3KQ59H18 835 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 SAPCD2Q86UD0 394 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 ZGPATQ8N5A5 531 aaKnown RBP20.61■□□□□ 0.89
UBE3D-208ENST00000626828 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 PCDHAC2Q9Y5I4 1007 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 FPGT-TNNI3KV9GXZ4 949 aa20.61■□□□□ 0.89
UBE3D-208ENST00000626828 SALL1Q9NSC2 1324 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms