RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 ANKIB1Q9P2G1 1089 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 SMAPO00193 183 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 NBPF7P0C2Y1 421 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 MS4A1P11836 297 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 ITGA6P23229 1130 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 LMBR1LQ6UX01 489 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 SP8Q8IXZ3 490 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 PLA2G12BQ9BX93 195 aa9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 ZNF277Q9NRM2 450 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 NSFL1CQ9UNZ2 370 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-221ENST00000625705 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 PPIP5K2O43314 1243 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 GNAI3P08754 354 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 KCNJ4P48050 445 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 CASP7P55210 303 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 DZIP1LQ8IYY4 767 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 LARGE2Q8N3Y3 721 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 SUCLG2Q96I99 432 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 LRRC37AA6NMS7 1700 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 SBF1O95248 1867 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 KDM2BQ8NHM5 1336 aa9.04□□□□□ -0.96
NPLOC4-221ENST00000625705 C3orf80F5H4A9 247 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 UFL1O94874 794 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 FOXO4P98177 505 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 C7orf43Q8WVR3 580 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 PSMD1Q99460 953 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 EYA3Q99504 573 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 GGA1Q9UJY5 639 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
NPLOC4-221ENST00000625705 EIF6P56537 245 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 GPSM2P81274 684 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 AOC3Q16853 763 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 INTS3Q68E01 1043 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 SLC51AQ86UW1 340 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 C16orf71Q8IYS4 520 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 TMEM57Q8N5G2 664 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 MEIS3Q99687 375 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 USP44Q9H0E7 712 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 TNNQ9UQP3 1299 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 LRRFIP2Q9Y608 721 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 UTYO14607 1347 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 XDHP47989 1333 aa9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-221ENST00000625705 DICER1Q9UPY3 1922 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 COL4A1P02462 1669 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 PLIN1O60240 522 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 CSF1RP07333 972 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 EPHA10Q5JZY3 1008 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 LDHAL6AQ6ZMR3 332 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 ZC3H12CQ9C0D7 883 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 ANKRD2Q9GZV1 360 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
NPLOC4-221ENST00000625705 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
NPLOC4-221ENST00000625705 GNAI2P04899 355 aa9□□□□□ -0.97
NPLOC4-221ENST00000625705 ATP2B4P23634 1241 aa9□□□□□ -0.97
NPLOC4-221ENST00000625705 PANK1Q8TE04 598 aa9□□□□□ -0.97
NPLOC4-221ENST00000625705 TATDN2Q93075 761 aa9□□□□□ -0.97
NPLOC4-221ENST00000625705 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
NPLOC4-221ENST00000625705 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
NPLOC4-221ENST00000625705 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 PRELPP51888 382 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 CHRNDQ07001 517 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 KIAA2012Q0VF49 1180 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 RABL6Q3YEC7 729 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 TBC1D16Q8TBP0 767 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 KCNV2Q8TDN2 545 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 GPR101Q96P66 508 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 RTFDC1Q9BY42 306 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 VPS33BQ9H267 617 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 CHMP4BQ9H444 224 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 MINPP1Q9UNW1 487 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 DUOX1Q9NRD9 1551 aa8.99□□□□□ -0.97
NPLOC4-221ENST00000625705 SNED1Q8TER0 1413 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 SRGAP3O43295 1099 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 RLBP1P12271 317 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms