RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
USH1C-211ENST00000624811 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
USH1C-211ENST00000624811 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
USH1C-211ENST00000624811 IL1R1P14778 569 aa17.33■□□□□ 0.36
USH1C-211ENST00000624811 MKRN3Q13064 507 aaKnown RBP17.33■□□□□ 0.36
USH1C-211ENST00000624811 DGKZQ13574 1117 aa17.33■□□□□ 0.36
USH1C-211ENST00000624811 DLGAP5Q15398 846 aa17.33■□□□□ 0.36
USH1C-211ENST00000624811 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
USH1C-211ENST00000624811 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
USH1C-211ENST00000624811 NF2P35240 595 aa17.32■□□□□ 0.36
USH1C-211ENST00000624811 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
USH1C-211ENST00000624811 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
USH1C-211ENST00000624811 FZD1Q9UP38 647 aa17.32■□□□□ 0.36
USH1C-211ENST00000624811 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 E9PSI1 815 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 GYG1P46976 350 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 CDCA7LQ96GN5 454 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 BICC1Q9H694 974 aaKnown RBP17.31■□□□□ 0.36
USH1C-211ENST00000624811 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
USH1C-211ENST00000624811 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
USH1C-211ENST00000624811 AOX1Q06278 1338 aa17.3■□□□□ 0.36
USH1C-211ENST00000624811 MMP14P50281 582 aa17.3■□□□□ 0.36
USH1C-211ENST00000624811 RBM5P52756 815 aaKnown RBP eCLIP17.3■□□□□ 0.36
USH1C-211ENST00000624811 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
USH1C-211ENST00000624811 UTYO14607 1347 aa17.29■□□□□ 0.36
USH1C-211ENST00000624811 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
USH1C-211ENST00000624811 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
USH1C-211ENST00000624811 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
USH1C-211ENST00000624811 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
USH1C-211ENST00000624811 ANGEL1Q9UNK9 670 aaKnown RBP17.29■□□□□ 0.36
USH1C-211ENST00000624811 PTPRCP08575 1304 aa17.28■□□□□ 0.36
USH1C-211ENST00000624811 HIBADHP31937 336 aaKnown RBP17.28■□□□□ 0.36
USH1C-211ENST00000624811 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
USH1C-211ENST00000624811 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
USH1C-211ENST00000624811 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
USH1C-211ENST00000624811 PRMT6Q96LA8 375 aaPredicted RBP17.28■□□□□ 0.36
USH1C-211ENST00000624811 DEFB129Q9H1M3 183 aa17.28■□□□□ 0.36
USH1C-211ENST00000624811 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
USH1C-211ENST00000624811 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
USH1C-211ENST00000624811 MYO1BO43795 1136 aa17.27■□□□□ 0.36
USH1C-211ENST00000624811 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
USH1C-211ENST00000624811 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.36
USH1C-211ENST00000624811 TDRD7Q8NHU6 1098 aaKnown RBP17.27■□□□□ 0.36
USH1C-211ENST00000624811 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
USH1C-211ENST00000624811 RIPOR2Q9Y4F9 1068 aa17.27■□□□□ 0.36
USH1C-211ENST00000624811 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
USH1C-211ENST00000624811 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 TBC1D8O95759 1140 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 FKBP1AP62942 108 aaKnown RBP17.26■□□□□ 0.35
USH1C-211ENST00000624811 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
USH1C-211ENST00000624811 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
USH1C-211ENST00000624811 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
USH1C-211ENST00000624811 SSC5DA1L4H1 1573 aa17.26■□□□□ 0.35
USH1C-211ENST00000624811 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
USH1C-211ENST00000624811 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
USH1C-211ENST00000624811 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
USH1C-211ENST00000624811 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
USH1C-211ENST00000624811 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
USH1C-211ENST00000624811 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
USH1C-211ENST00000624811 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
USH1C-211ENST00000624811 GRIK5Q16478 980 aa17.23■□□□□ 0.35
USH1C-211ENST00000624811 NBPF12Q5TAG4 269 aaPredicted RBP17.23■□□□□ 0.35
USH1C-211ENST00000624811 CLMNQ96JQ2 1002 aa17.23■□□□□ 0.35
USH1C-211ENST00000624811 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
USH1C-211ENST00000624811 RASA3Q14644 834 aa17.22■□□□□ 0.35
USH1C-211ENST00000624811 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
USH1C-211ENST00000624811 LDLRAD1Q5T700 205 aa17.22■□□□□ 0.35
USH1C-211ENST00000624811 ZNF70Q9UC06 446 aaPredicted RBP17.22■□□□□ 0.35
USH1C-211ENST00000624811 PPP2R3BQ9Y5P8 575 aa17.22■□□□□ 0.35
USH1C-211ENST00000624811 PPP1R12BO60237 982 aaPredicted RBP17.21■□□□□ 0.35
USH1C-211ENST00000624811 PDE8BO95263 885 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 CRKP46108 304 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 TM4SF4P48230 202 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 BCAMP50895 628 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
USH1C-211ENST00000624811 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 SLC10A4Q96EP9 437 aa17.21■□□□□ 0.35
USH1C-211ENST00000624811 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
USH1C-211ENST00000624811 SREBF2Q12772 1141 aa17.2■□□□□ 0.34
USH1C-211ENST00000624811 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
USH1C-211ENST00000624811 DZIP1LQ8IYY4 767 aaKnown RBP17.2■□□□□ 0.34
USH1C-211ENST00000624811 ZNF296Q8WUU4 475 aaPredicted RBP17.2■□□□□ 0.34
USH1C-211ENST00000624811 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
USH1C-211ENST00000624811 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
USH1C-211ENST00000624811 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
USH1C-211ENST00000624811 MLLT1Q03111 559 aaPredicted RBP17.19■□□□□ 0.34
USH1C-211ENST00000624811 CDAN1Q8IWY9 1227 aa17.19■□□□□ 0.34
USH1C-211ENST00000624811 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
USH1C-211ENST00000624811 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
USH1C-211ENST00000624811 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
USH1C-211ENST00000624811 LAMB1P07942 1786 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms