RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 MYL1P05976 194 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 KCNA2P16389 499 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 BDNFP23560 247 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 COPB2P35606 906 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
USB1-216ENST00000624720 C3orf20Q8ND61 904 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 TRIM11Q96F44 468 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 PIK3R4Q99570 1358 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 SPATA7Q9P0W8 599 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 SLC27A2O14975 620 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 SGSM2O43147 1006 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 ZBED6P86452 979 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 KCNA1Q09470 495 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
USB1-216ENST00000624720 KLHL10Q6JEL2 608 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 TMEM110Q86TL2 294 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
USB1-216ENST00000624720 PARD3BQ8TEW8 1205 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 RBSNQ9H1K0 784 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
USB1-216ENST00000624720 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 SBNO1A3KN83 1393 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 F6X3S4 739 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 KCNQ3O43525 872 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 CHMLP26374 656 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 STIP1P31948 543 aaKnown RBP10.62□□□□□ -0.71
USB1-216ENST00000624720 GNAI1P63096 354 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 DHRS1Q96LJ7 313 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 MRFAP1Q9Y605 127 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 KIF20BQ96Q89 1820 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 CA8P35219 290 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
USB1-216ENST00000624720 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
USB1-216ENST00000624720 LSM14AQ8ND56 463 aaKnown RBP10.62□□□□□ -0.71
USB1-216ENST00000624720 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 MSH6P52701 1360 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 F8VZ95 297 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 VAMP4O75379 141 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 KRT38O76015 456 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 BAG4O95429 457 aaKnown RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 MCCD1P59942 119 aaPredicted RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 TPM4P67936 248 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 BRINP3Q76B58 766 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 SPATA21Q7Z572 469 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 SLAIN2Q9P270 581 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 MYO1BO43795 1136 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 GCKP35557 465 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 PIP4K2AP48426 406 aaPredicted RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 APLP1P51693 650 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 USP4Q13107 963 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 ZNF662Q6ZS27 426 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 N4BP2L2Q92802 583 aaPredicted RBP10.61□□□□□ -0.71
USB1-216ENST00000624720 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 C1orf167Q5SNV9 1468 aa10.61□□□□□ -0.71
USB1-216ENST00000624720 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 IVLP07476 585 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 LRRC31Q6UY01 552 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 IQUBQ8NA54 791 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 IP6K1Q92551 441 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 FAM81BQ96LP2 452 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 RMDN2Q96LZ7 410 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 SRRTQ9BXP5 876 aaKnown RBP10.6□□□□□ -0.71
USB1-216ENST00000624720 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 TPPPO94811 219 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 CYP11B2P19099 503 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 FILIP1LQ4L180 1135 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 SOGA3Q5TF21 947 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 KIAA0825Q8IV33 1275 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 TMEM98Q9Y2Y6 226 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 USP31Q70CQ4 1352 aa10.6□□□□□ -0.71
USB1-216ENST00000624720 HMGB1P1B2RPK0 211 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 RAB27AP51159 221 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 PREPLQ4J6C6 727 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 G2E3Q7L622 706 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 XRN1Q8IZH2 1706 aaKnown RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 XIRP1Q702N8 1843 aaKnown RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 HMMRO75330 724 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 NF2P35240 595 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 CORO7P57737 925 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 SLC39A6Q13433 755 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 ANKRD45Q5TZF3 282 aa10.59□□□□□ -0.71
USB1-216ENST00000624720 CENPQQ7L2Z9 268 aaPredicted RBP10.59□□□□□ -0.71
USB1-216ENST00000624720 ARHGEF25Q86VW2 580 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms