RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 CHMP4BP1P59074 171 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 CRNKL1Q9BZJ0 848 aaKnown RBP16.91■□□□□ 0.3
C9orf139-202ENST00000623196 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 NPATQ14207 1427 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 PHACTR2O75167 634 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
C9orf139-202ENST00000623196 ASIC1P78348 528 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 PAIP2Q9BPZ3 127 aaKnown RBP16.91■□□□□ 0.3
C9orf139-202ENST00000623196 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 MXRA7P84157 204 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 SREK1Q8WXA9 508 aaKnown RBP16.91■□□□□ 0.3
C9orf139-202ENST00000623196 VPS18Q9P253 973 aa16.91■□□□□ 0.3
C9orf139-202ENST00000623196 SYT10Q6XYQ8 523 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 SERPINA10Q9UK55 444 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 PKP1Q13835 747 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 ATP2A1O14983 1001 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 C6orf229H3BNL8 230 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 SNRPA1P09661 255 aaKnown RBP16.9■□□□□ 0.3
C9orf139-202ENST00000623196 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 EYA1Q99502 592 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 IFNKQ9P0W0 207 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 ZFYVE9O95405 1425 aa16.9■□□□□ 0.3
C9orf139-202ENST00000623196 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.3
C9orf139-202ENST00000623196 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.3
C9orf139-202ENST00000623196 DHX58Q96C10 678 aa16.89■□□□□ 0.3
C9orf139-202ENST00000623196 CABP5Q9NP86 173 aa16.89■□□□□ 0.3
C9orf139-202ENST00000623196 LZTFL1Q9NQ48 299 aa16.89■□□□□ 0.3
C9orf139-202ENST00000623196 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
C9orf139-202ENST00000623196 KRT13P13646 458 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
C9orf139-202ENST00000623196 CPLX4Q7Z7G2 160 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
C9orf139-202ENST00000623196 GUCA1BQ9UMX6 200 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 ZEB2O60315 1214 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 HLA-DOAP06340 250 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 ZNF569Q5MCW4 686 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
C9orf139-202ENST00000623196 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
C9orf139-202ENST00000623196 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
C9orf139-202ENST00000623196 LUC7L2Q9Y383 392 aaKnown RBP16.88■□□□□ 0.29
C9orf139-202ENST00000623196 PNMA6EA0A0J9YXQ4 647 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 IGSF3O75054 1194 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 CD2BP2O95400 341 aaKnown RBP16.87■□□□□ 0.29
C9orf139-202ENST00000623196 TRAF1Q13077 416 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 GADD45BO75293 160 aaPredicted RBP16.87■□□□□ 0.29
C9orf139-202ENST00000623196 RHOXF2BP0C7M4 288 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
C9orf139-202ENST00000623196 CCDC114Q96M63 670 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 RHOXF2Q9BQY4 288 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 CAPZA3Q96KX2 299 aa16.87■□□□□ 0.29
C9orf139-202ENST00000623196 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
C9orf139-202ENST00000623196 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
C9orf139-202ENST00000623196 GRM8O00222 908 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
C9orf139-202ENST00000623196 CALML3P27482 149 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 BICD1Q96G01 975 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 BICDL2A1A5D9 508 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
C9orf139-202ENST00000623196 ARID5AQ03989 594 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 BRAPQ7Z569 592 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 SYNCQ9H7C4 482 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 CYP7A1P22680 504 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 CFAP58Q5T655 872 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 ERO1AQ96HE7 468 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
C9orf139-202ENST00000623196 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 STX17P56962 302 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 HDXQ7Z353 690 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 SELENOSQ9BQE4 189 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 TMEM63CQ9P1W3 806 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 UBXN1Q04323 297 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 FAM76AQ8TAV0 307 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 DNAJC21Q5F1R6 531 aaKnown RBP16.85■□□□□ 0.29
C9orf139-202ENST00000623196 C10orf67Q8IYJ2 551 aa16.85■□□□□ 0.29
C9orf139-202ENST00000623196 UTP14AQ9BVJ6 771 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms