RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 ANGEL1Q9UNK9 670 aaKnown RBP30.19■■■□□ 2.42
CPSF1-214ENST00000622776 GRM8O00222 908 aa30.18■■■□□ 2.42
CPSF1-214ENST00000622776 SREBF2Q12772 1141 aa30.18■■■□□ 2.42
CPSF1-214ENST00000622776 CCDC57Q2TAC2 916 aa30.18■■■□□ 2.42
CPSF1-214ENST00000622776 LDHAL6AQ6ZMR3 332 aa30.17■■■□□ 2.42
CPSF1-214ENST00000622776 ZNF594Q96JF6 807 aaPredicted RBP30.17■■■□□ 2.42
CPSF1-214ENST00000622776 PCDHAC2Q9Y5I4 1007 aa30.17■■■□□ 2.42
CPSF1-214ENST00000622776 COL1A1P02452 1464 aaPredicted RBP30.17■■■□□ 2.42
CPSF1-214ENST00000622776 F8W031 263 aaPredicted RBP30.16■■■□□ 2.42
CPSF1-214ENST00000622776 TAF7LQ5H9L4 462 aa30.16■■■□□ 2.42
CPSF1-214ENST00000622776 GPR25O00155 361 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 PLIN1O60240 522 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 FKBP1AP62942 108 aaKnown RBP30.15■■■□□ 2.42
CPSF1-214ENST00000622776 PKN2Q16513 984 aaKnown RBP30.15■■■□□ 2.42
CPSF1-214ENST00000622776 CFAP100Q494V2 611 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 NOM1Q5C9Z4 860 aaKnown RBP30.15■■■□□ 2.42
CPSF1-214ENST00000622776 SPRYD7Q5W111 196 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 CNNM1Q9NRU3 951 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 FZD1Q9UP38 647 aa30.15■■■□□ 2.42
CPSF1-214ENST00000622776 A0A1B0GUL6 1792 aa30.14■■■□□ 2.42
CPSF1-214ENST00000622776 SLC34A2O95436 690 aa30.14■■■□□ 2.42
CPSF1-214ENST00000622776 C9orf78Q9NZ63 289 aaPredicted RBP30.14■■■□□ 2.42
CPSF1-214ENST00000622776 HPS5Q9UPZ3 1129 aa30.14■■■□□ 2.42
CPSF1-214ENST00000622776 JAG2Q9Y219 1238 aa30.14■■■□□ 2.42
CPSF1-214ENST00000622776 SPDYE2BA6NHP3 402 aa30.13■■■□□ 2.41
CPSF1-214ENST00000622776 SPDYE6P0CI01 402 aa30.13■■■□□ 2.41
CPSF1-214ENST00000622776 PPP2R3BQ9Y5P8 575 aa30.13■■■□□ 2.41
CPSF1-214ENST00000622776 TNRC18O15417 2968 aaPredicted RBP30.12■■■□□ 2.41
CPSF1-214ENST00000622776 MYO1BO43795 1136 aa30.12■■■□□ 2.41
CPSF1-214ENST00000622776 ALDH1L1O75891 902 aa30.12■■■□□ 2.41
CPSF1-214ENST00000622776 MAP3K11Q16584 847 aa30.12■■■□□ 2.41
CPSF1-214ENST00000622776 SLC10A4Q96EP9 437 aa30.12■■■□□ 2.41
CPSF1-214ENST00000622776 PRMT6Q96LA8 375 aaPredicted RBP30.12■■■□□ 2.41
CPSF1-214ENST00000622776 CFHR5Q9BXR6 569 aa30.12■■■□□ 2.41
CPSF1-214ENST00000622776 CLRN2A0PK11 232 aa30.11■■■□□ 2.41
CPSF1-214ENST00000622776 PPP1R12BO60237 982 aaPredicted RBP30.1■■■□□ 2.41
CPSF1-214ENST00000622776 SLC4A10Q6U841 1118 aa30.1■■■□□ 2.41
CPSF1-214ENST00000622776 SRCIN1Q9C0H9 1055 aa30.1■■■□□ 2.41
CPSF1-214ENST00000622776 R3HDMLQ9H3Y0 253 aa30.1■■■□□ 2.41
CPSF1-214ENST00000622776 SSC5DA1L4H1 1573 aa30.09■■■□□ 2.41
CPSF1-214ENST00000622776 AOX1Q06278 1338 aa30.09■■■□□ 2.41
CPSF1-214ENST00000622776 SUPT20HL1Q3ZLR7 823 aa30.09■■■□□ 2.41
CPSF1-214ENST00000622776 VEZTQ9HBM0 779 aa30.09■■■□□ 2.41
CPSF1-214ENST00000622776 FAM205AQ6ZU69 1335 aa30.08■■■□□ 2.41
CPSF1-214ENST00000622776 FKTNO75072 461 aa30.08■■■□□ 2.41
CPSF1-214ENST00000622776 RBM5P52756 815 aaKnown RBP eCLIP30.08■■■□□ 2.41
CPSF1-214ENST00000622776 CLMNQ96JQ2 1002 aa30.08■■■□□ 2.41
CPSF1-214ENST00000622776 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.08■■■□□ 2.41
CPSF1-214ENST00000622776 ECM29Q5VYK3 1845 aa30.08■■■□□ 2.41
CPSF1-214ENST00000622776 MANSC4A6NHS7 340 aaPredicted RBP30.07■■■□□ 2.4
CPSF1-214ENST00000622776 ALDH1A1P00352 501 aa30.07■■■□□ 2.4
CPSF1-214ENST00000622776 INHBEP58166 350 aa30.07■■■□□ 2.4
CPSF1-214ENST00000622776 UBE4AQ14139 1066 aa30.07■■■□□ 2.4
CPSF1-214ENST00000622776 TDRD7Q8NHU6 1098 aaKnown RBP30.07■■■□□ 2.4
CPSF1-214ENST00000622776 NBPF12Q5TAG4 269 aaPredicted RBP30.06■■■□□ 2.4
CPSF1-214ENST00000622776 FAM9BQ8IZU0 186 aa30.06■■■□□ 2.4
CPSF1-214ENST00000622776 SUCLG2Q96I99 432 aa30.06■■■□□ 2.4
CPSF1-214ENST00000622776 WNK4Q96J92 1243 aa30.06■■■□□ 2.4
CPSF1-214ENST00000622776 UNCXA6NJT0 531 aa30.05■■■□□ 2.4
CPSF1-214ENST00000622776 ZBTB48P10074 688 aaPredicted RBP30.05■■■□□ 2.4
CPSF1-214ENST00000622776 KAZALD1Q96I82 304 aa30.05■■■□□ 2.4
CPSF1-214ENST00000622776 PUS3Q9BZE2 481 aaKnown RBP30.05■■■□□ 2.4
CPSF1-214ENST00000622776 ZNF316A6NFI3 1004 aaPredicted RBP30.04■■■□□ 2.4
CPSF1-214ENST00000622776 HIBADHP31937 336 aaKnown RBP30.04■■■□□ 2.4
CPSF1-214ENST00000622776 GYG1P46976 350 aa30.04■■■□□ 2.4
CPSF1-214ENST00000622776 RASA3Q14644 834 aa30.04■■■□□ 2.4
CPSF1-214ENST00000622776 MFSD14BQ5SR56 506 aa30.04■■■□□ 2.4
CPSF1-214ENST00000622776 FBXO46Q6PJ61 603 aaPredicted RBP30.04■■■□□ 2.4
CPSF1-214ENST00000622776 IFNL1Q8IU54 200 aa30.04■■■□□ 2.4
CPSF1-214ENST00000622776 FAM84BQ96KN1 310 aaPredicted RBP30.04■■■□□ 2.4
CPSF1-214ENST00000622776 USP2O75604 605 aaPredicted RBP30.02■■■□□ 2.4
CPSF1-214ENST00000622776 NBPF7P0C2Y1 421 aaPredicted RBP30.02■■■□□ 2.4
CPSF1-214ENST00000622776 IREB2P48200 963 aaKnown RBP30.02■■■□□ 2.4
CPSF1-214ENST00000622776 TTF2Q9UNY4 1162 aaKnown RBP30.02■■■□□ 2.4
CPSF1-214ENST00000622776 ZNF70Q9UC06 446 aaPredicted RBP30.01■■■□□ 2.39
CPSF1-214ENST00000622776 SERPINA10Q9UK55 444 aa30.01■■■□□ 2.39
CPSF1-214ENST00000622776 RIPOR2Q9Y4F9 1068 aa30.01■■■□□ 2.39
CPSF1-214ENST00000622776 UTYO14607 1347 aa30■■■□□ 2.39
CPSF1-214ENST00000622776 IGF2BP3O00425 579 aaKnown RBP eCLIP30■■■□□ 2.39
CPSF1-214ENST00000622776 SPDYE2Q495Y8 402 aa30■■■□□ 2.39
CPSF1-214ENST00000622776 MROH5Q6ZUA9 1318 aa29.99■■■□□ 2.39
CPSF1-214ENST00000622776 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
CPSF1-214ENST00000622776 TNFAIP1Q13829 316 aa29.99■■■□□ 2.39
CPSF1-214ENST00000622776 ANKRD13AQ8IZ07 590 aa29.99■■■□□ 2.39
CPSF1-214ENST00000622776 TDRD3Q9H7E2 651 aaKnown RBP29.99■■■□□ 2.39
CPSF1-214ENST00000622776 BICC1Q9H694 974 aaKnown RBP29.98■■■□□ 2.39
CPSF1-214ENST00000622776 GJA5P36382 358 aa29.97■■■□□ 2.39
CPSF1-214ENST00000622776 RABL6Q3YEC7 729 aaPredicted RBP29.97■■■□□ 2.39
CPSF1-214ENST00000622776 DZIP1LQ8IYY4 767 aaKnown RBP29.97■■■□□ 2.39
CPSF1-214ENST00000622776 FBXO33Q7Z6M2 555 aa29.96■■■□□ 2.39
CPSF1-214ENST00000622776 ZNF521Q96K83 1311 aa29.96■■■□□ 2.39
CPSF1-214ENST00000622776 CRKP46108 304 aa29.95■■■□□ 2.39
CPSF1-214ENST00000622776 VPS37DQ86XT2 251 aa29.95■■■□□ 2.39
CPSF1-214ENST00000622776 MRPL50Q8N5N7 158 aaKnown RBP29.95■■■□□ 2.39
CPSF1-214ENST00000622776 LRRC24Q50LG9 513 aa29.94■■■□□ 2.38
CPSF1-214ENST00000622776 OTUD7BQ6GQQ9 843 aa29.94■■■□□ 2.38
CPSF1-214ENST00000622776 ANKRD44Q8N8A2 993 aa29.94■■■□□ 2.38
CPSF1-214ENST00000622776 IQSEC3Q9UPP2 1182 aaPredicted RBP29.94■■■□□ 2.38
CPSF1-214ENST00000622776 TRIM17Q9Y577 477 aa29.94■■■□□ 2.38
CPSF1-214ENST00000622776 GRIK5Q16478 980 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms