RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 PCDHAC2Q9Y5I4 1007 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 LMBR1LQ6UX01 489 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 C2orf69Q8N8R5 385 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 MPHOSPH8Q99549 860 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 COA1Q9GZY4 146 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 AOX1Q06278 1338 aa14.56□□□□□ -0.08
CPNE3-210ENST00000621245 ANKRD18BA2A2Z9 1011 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 GRM8O00222 908 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 WNT10BO00744 389 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 SLC10A3P09131 477 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 ZNF157P51786 506 aaPredicted RBP14.55□□□□□ -0.08
CPNE3-210ENST00000621245 GTF2IP78347 998 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 KIF23Q02241 960 aaPredicted RBP14.55□□□□□ -0.08
CPNE3-210ENST00000621245 NOGQ13253 232 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 STRIP1Q5VSL9 837 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 RASAL3Q86YV0 1011 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 KIAA0825Q8IV33 1275 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 BEGAINQ9BUH8 593 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 PITPNM2Q9BZ72 1349 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 LAMB1P07942 1786 aa14.55□□□□□ -0.08
CPNE3-210ENST00000621245 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 BRCA2P51587 3418 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 SUCLG2Q96I99 432 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 CD209Q9NNX6 404 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 FZD1Q9UP38 647 aa14.54□□□□□ -0.08
CPNE3-210ENST00000621245 KCNJ4P48050 445 aa14.53□□□□□ -0.08
CPNE3-210ENST00000621245 IFIT5Q13325 482 aaKnown RBP14.53□□□□□ -0.08
CPNE3-210ENST00000621245 TTLL5Q6EMB2 1281 aa14.53□□□□□ -0.08
CPNE3-210ENST00000621245 ZBED3Q96IU2 234 aaPredicted RBP14.53□□□□□ -0.08
CPNE3-210ENST00000621245 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
CPNE3-210ENST00000621245 UBE2Q2LH0YL09 131 aa14.52□□□□□ -0.09
CPNE3-210ENST00000621245 PLIN1O60240 522 aa14.52□□□□□ -0.09
CPNE3-210ENST00000621245 NBPF7P0C2Y1 421 aaPredicted RBP14.52□□□□□ -0.09
CPNE3-210ENST00000621245 MRPL50Q8N5N7 158 aaKnown RBP14.52□□□□□ -0.09
CPNE3-210ENST00000621245 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
CPNE3-210ENST00000621245 CSRNP1Q96S65 589 aa14.52□□□□□ -0.09
CPNE3-210ENST00000621245 MYO3BQ8WXR4 1341 aa14.51□□□□□ -0.09
CPNE3-210ENST00000621245 SLC34A2O95436 690 aa14.51□□□□□ -0.09
CPNE3-210ENST00000621245 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
CPNE3-210ENST00000621245 MCOLN1Q9GZU1 580 aa14.51□□□□□ -0.09
CPNE3-210ENST00000621245 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
CPNE3-210ENST00000621245 F8W031 263 aaPredicted RBP14.5□□□□□ -0.09
CPNE3-210ENST00000621245 CA12O43570 354 aa14.5□□□□□ -0.09
CPNE3-210ENST00000621245 C15orf52Q6ZUT6 534 aaKnown RBP14.5□□□□□ -0.09
CPNE3-210ENST00000621245 CCDC102AQ96A19 550 aa14.5□□□□□ -0.09
CPNE3-210ENST00000621245 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
CPNE3-210ENST00000621245 SRCIN1Q9C0H9 1055 aa14.5□□□□□ -0.09
CPNE3-210ENST00000621245 BICC1Q9H694 974 aaKnown RBP14.5□□□□□ -0.09
CPNE3-210ENST00000621245 C9orf78Q9NZ63 289 aaPredicted RBP14.5□□□□□ -0.09
CPNE3-210ENST00000621245 MKI67P46013 3256 aaKnown RBP14.49□□□□□ -0.09
CPNE3-210ENST00000621245 TRPA1O75762 1119 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 ALDH1L1O75891 902 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 IL1R1P14778 569 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 MKRN3Q13064 507 aaKnown RBP14.49□□□□□ -0.09
CPNE3-210ENST00000621245 PRKG1Q13976 671 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 OGFOD1Q8N543 542 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 ANKRD44Q8N8A2 993 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 SSH1Q8WYL5 1049 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 CNNM1Q9NRU3 951 aa14.49□□□□□ -0.09
CPNE3-210ENST00000621245 UTYO14607 1347 aa14.48□□□□□ -0.09
CPNE3-210ENST00000621245 CCDC85CA6NKD9 419 aa14.48□□□□□ -0.09
CPNE3-210ENST00000621245 GYG1P46976 350 aa14.48□□□□□ -0.09
CPNE3-210ENST00000621245 CLRN2A0PK11 232 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 DGKZQ13574 1117 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 GRIK5Q16478 980 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 KLHDC4Q8TBB5 520 aa14.47□□□□□ -0.09
CPNE3-210ENST00000621245 COL1A1P02452 1464 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 FKBP1BP68106 108 aa14.46□□□□□ -0.09
CPNE3-210ENST00000621245 PTPN12Q05209 780 aaKnown RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 SLFN5Q08AF3 891 aa14.46□□□□□ -0.09
CPNE3-210ENST00000621245 TTLL12Q14166 644 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 RABL6Q3YEC7 729 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 CFAP100Q494V2 611 aa14.46□□□□□ -0.09
CPNE3-210ENST00000621245 CDAN1Q8IWY9 1227 aa14.46□□□□□ -0.09
CPNE3-210ENST00000621245 PRMT6Q96LA8 375 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-210ENST00000621245 SAGE1Q9NXZ1 904 aa14.46□□□□□ -0.09
CPNE3-210ENST00000621245 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-210ENST00000621245 DLGAP5Q15398 846 aa14.45□□□□□ -0.1
CPNE3-210ENST00000621245 APOBEC3FQ8IUX4 373 aaKnown RBP14.45□□□□□ -0.1
CPNE3-210ENST00000621245 MTMR14Q8NCE2 650 aa14.45□□□□□ -0.1
CPNE3-210ENST00000621245 FAM84BQ96KN1 310 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-210ENST00000621245 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
CPNE3-210ENST00000621245 HDAC9Q9UKV0 1011 aa14.45□□□□□ -0.1
CPNE3-210ENST00000621245 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-210ENST00000621245 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
CPNE3-210ENST00000621245 FAM205AQ6ZU69 1335 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 E9PSI1 815 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 VGLL2Q8N8G2 317 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 TDRD7Q8NHU6 1098 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms