RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 DIEXFQ68CQ4 756 aaKnown RBP25.74■■□□□ 1.71
SMC6-210ENST00000621152 KLHDC4Q8TBB5 520 aa25.74■■□□□ 1.71
SMC6-210ENST00000621152 CCDC102AQ96A19 550 aa25.74■■□□□ 1.71
SMC6-210ENST00000621152 FAM84BQ96KN1 310 aaPredicted RBP25.74■■□□□ 1.71
SMC6-210ENST00000621152 ZIC5Q96T25 663 aa25.74■■□□□ 1.71
SMC6-210ENST00000621152 API5Q9BZZ5 524 aaKnown RBP25.74■■□□□ 1.71
SMC6-210ENST00000621152 RARSP54136 660 aaKnown RBP25.73■■□□□ 1.71
SMC6-210ENST00000621152 DLGAP5Q15398 846 aa25.73■■□□□ 1.71
SMC6-210ENST00000621152 TDRD7Q8NHU6 1098 aaKnown RBP25.73■■□□□ 1.71
SMC6-210ENST00000621152 FKBP1AP62942 108 aaKnown RBP25.72■■□□□ 1.71
SMC6-210ENST00000621152 ZBED3Q96IU2 234 aaPredicted RBP25.72■■□□□ 1.71
SMC6-210ENST00000621152 CAPN15O75808 1086 aa25.71■■□□□ 1.71
SMC6-210ENST00000621152 FAM155AB1AL88 458 aaPredicted RBP25.7■■□□□ 1.7
SMC6-210ENST00000621152 PDE8BO95263 885 aa25.7■■□□□ 1.7
SMC6-210ENST00000621152 TSKSQ9UJT2 592 aa25.7■■□□□ 1.7
SMC6-210ENST00000621152 FAM205AQ6ZU69 1335 aa25.69■■□□□ 1.7
SMC6-210ENST00000621152 UBTFL1P0CB47 393 aaPredicted RBP25.69■■□□□ 1.7
SMC6-210ENST00000621152 FKBP1BP68106 108 aa25.69■■□□□ 1.7
SMC6-210ENST00000621152 MOB2Q70IA6 237 aa25.69■■□□□ 1.7
SMC6-210ENST00000621152 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
SMC6-210ENST00000621152 VPS37DQ86XT2 251 aa25.69■■□□□ 1.7
SMC6-210ENST00000621152 UBE2Q2LH0YL09 131 aa25.68■■□□□ 1.7
SMC6-210ENST00000621152 RFX5P48382 616 aaPredicted RBP25.68■■□□□ 1.7
SMC6-210ENST00000621152 KIF23Q02241 960 aaPredicted RBP25.68■■□□□ 1.7
SMC6-210ENST00000621152 TTLL12Q14166 644 aaPredicted RBP25.68■■□□□ 1.7
SMC6-210ENST00000621152 CFAP100Q494V2 611 aa25.68■■□□□ 1.7
SMC6-210ENST00000621152 APOBEC3FQ8IUX4 373 aaKnown RBP25.68■■□□□ 1.7
SMC6-210ENST00000621152 MTMR14Q8NCE2 650 aa25.68■■□□□ 1.7
SMC6-210ENST00000621152 PCDHAC2Q9Y5I4 1007 aa25.68■■□□□ 1.7
SMC6-210ENST00000621152 ZNF646O15015 1829 aaPredicted RBP25.67■■□□□ 1.7
SMC6-210ENST00000621152 RBM5P52756 815 aaKnown RBP eCLIP25.67■■□□□ 1.7
SMC6-210ENST00000621152 CAVIN4Q5BKX8 364 aa25.67■■□□□ 1.7
SMC6-210ENST00000621152 VGLL2Q8N8G2 317 aa25.67■■□□□ 1.7
SMC6-210ENST00000621152 ARHGAP45Q92619 1136 aa25.67■■□□□ 1.7
SMC6-210ENST00000621152 PRMT6Q96LA8 375 aaPredicted RBP25.67■■□□□ 1.7
SMC6-210ENST00000621152 EYA2O00167 538 aa25.66■■□□□ 1.7
SMC6-210ENST00000621152 CA12O43570 354 aa25.66■■□□□ 1.7
SMC6-210ENST00000621152 NF2P35240 595 aa25.66■■□□□ 1.7
SMC6-210ENST00000621152 MFSD14BQ5SR56 506 aa25.66■■□□□ 1.7
SMC6-210ENST00000621152 IQSEC3Q9UPP2 1182 aaPredicted RBP25.66■■□□□ 1.7
SMC6-210ENST00000621152 HDAC5Q9UQL6 1122 aa25.66■■□□□ 1.7
SMC6-210ENST00000621152 A0A1B0GUL6 1792 aa25.65■■□□□ 1.7
SMC6-210ENST00000621152 MYO1BO43795 1136 aa25.65■■□□□ 1.7
SMC6-210ENST00000621152 FRAT2O75474 233 aaPredicted RBP25.65■■□□□ 1.7
SMC6-210ENST00000621152 PTPN12Q05209 780 aaKnown RBP25.65■■□□□ 1.7
SMC6-210ENST00000621152 THSD7BQ9C0I4 1608 aa25.65■■□□□ 1.7
SMC6-210ENST00000621152 SLC10A3P09131 477 aa25.64■■□□□ 1.7
SMC6-210ENST00000621152 DEFB129Q9H1M3 183 aa25.64■■□□□ 1.7
SMC6-210ENST00000621152 TTF2Q9UNY4 1162 aaKnown RBP25.64■■□□□ 1.7
SMC6-210ENST00000621152 LRRFIP2Q9Y608 721 aaKnown RBP25.64■■□□□ 1.7
SMC6-210ENST00000621152 CLRN2A0PK11 232 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 SPDYE2BA6NHP3 402 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 SPDYE6P0CI01 402 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 BCAMP50895 628 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
SMC6-210ENST00000621152 CHAF1AQ13111 956 aaPredicted RBP25.63■■□□□ 1.69
SMC6-210ENST00000621152 PRKG1Q13976 671 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
SMC6-210ENST00000621152 IPO8O15397 1037 aaKnown RBP25.62■■□□□ 1.69
SMC6-210ENST00000621152 BCAR3O75815 825 aa25.62■■□□□ 1.69
SMC6-210ENST00000621152 IFIT1P09914 478 aaKnown RBP25.62■■□□□ 1.69
SMC6-210ENST00000621152 PUM3Q15397 648 aaKnown RBP25.62■■□□□ 1.69
SMC6-210ENST00000621152 INTS3Q68E01 1043 aaKnown RBP25.62■■□□□ 1.69
SMC6-210ENST00000621152 MEIS3Q99687 375 aa25.62■■□□□ 1.69
SMC6-210ENST00000621152 FGFR2P21802 821 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 ATG9AQ7Z3C6 839 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 RASAL3Q86YV0 1011 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 CSRNP1Q96S65 589 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 SIL1Q9H173 461 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 VEZTQ9HBM0 779 aa25.61■■□□□ 1.69
SMC6-210ENST00000621152 ARMC9Q7Z3E5 817 aa25.6■■□□□ 1.69
SMC6-210ENST00000621152 FRAT1Q92837 279 aaPredicted RBP25.6■■□□□ 1.69
SMC6-210ENST00000621152 LPIN2Q92539 896 aa25.59■■□□□ 1.69
SMC6-210ENST00000621152 CEP126Q9P2H0 1117 aa25.59■■□□□ 1.69
SMC6-210ENST00000621152 SERPINA10Q9UK55 444 aa25.59■■□□□ 1.69
SMC6-210ENST00000621152 AOX1Q06278 1338 aa25.59■■□□□ 1.69
SMC6-210ENST00000621152 SLC5A1P13866 664 aa25.58■■□□□ 1.69
SMC6-210ENST00000621152 GRIK5Q16478 980 aa25.58■■□□□ 1.69
SMC6-210ENST00000621152 TBC1D22AQ8WUA7 517 aa25.58■■□□□ 1.69
SMC6-210ENST00000621152 FBXO3Q9UK99 471 aa25.58■■□□□ 1.69
SMC6-210ENST00000621152 TRPA1O75762 1119 aa25.57■■□□□ 1.68
SMC6-210ENST00000621152 CIAO1O76071 339 aa25.57■■□□□ 1.68
SMC6-210ENST00000621152 GNAI3P08754 354 aa25.57■■□□□ 1.68
SMC6-210ENST00000621152 REM2Q8IYK8 340 aaPredicted RBP25.57■■□□□ 1.68
SMC6-210ENST00000621152 TDRD3Q9H7E2 651 aaKnown RBP25.57■■□□□ 1.68
SMC6-210ENST00000621152 RNF186Q9NXI6 227 aa25.57■■□□□ 1.68
SMC6-210ENST00000621152 ANGEL1Q9UNK9 670 aaKnown RBP25.57■■□□□ 1.68
SMC6-210ENST00000621152 PA2G4Q9UQ80 394 aaKnown RBP25.57■■□□□ 1.68
SMC6-210ENST00000621152 PAPPA2Q9BXP8 1791 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 TRIM27P14373 513 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 CRKP46108 304 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 SUPT20HL1Q3ZLR7 823 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 ATF7IPQ6VMQ6 1270 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 DZIP1LQ8IYY4 767 aaKnown RBP25.56■■□□□ 1.68
SMC6-210ENST00000621152 ZNF70Q9UC06 446 aaPredicted RBP25.56■■□□□ 1.68
SMC6-210ENST00000621152 FZD1Q9UP38 647 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 TNNQ9UQP3 1299 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 PPP2R3BQ9Y5P8 575 aa25.56■■□□□ 1.68
SMC6-210ENST00000621152 RASA3Q14644 834 aa25.55■■□□□ 1.68
SMC6-210ENST00000621152 CLUAP1Q96AJ1 413 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms