RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 RABL6Q3YEC7 729 aaPredicted RBP30.2■■■□□ 2.43
ATXN3-252ENST00000620536 APOBEC3FQ8IUX4 373 aaKnown RBP30.2■■■□□ 2.43
ATXN3-252ENST00000620536 MROH5Q6ZUA9 1318 aa30.2■■■□□ 2.42
ATXN3-252ENST00000620536 FKBP1AP62942 108 aaKnown RBP30.19■■■□□ 2.42
ATXN3-252ENST00000620536 ZBED3Q96IU2 234 aaPredicted RBP30.19■■■□□ 2.42
ATXN3-252ENST00000620536 PAPPA2Q9BXP8 1791 aa30.18■■■□□ 2.42
ATXN3-252ENST00000620536 F8W031 263 aaPredicted RBP30.18■■■□□ 2.42
ATXN3-252ENST00000620536 TRMT2AQ8IZ69 625 aaKnown RBP30.18■■■□□ 2.42
ATXN3-252ENST00000620536 ANKRD44Q8N8A2 993 aa30.18■■■□□ 2.42
ATXN3-252ENST00000620536 RIPOR2Q9Y4F9 1068 aa30.18■■■□□ 2.42
ATXN3-252ENST00000620536 HIBADHP31937 336 aaKnown RBP30.17■■■□□ 2.42
ATXN3-252ENST00000620536 MOB2Q70IA6 237 aa30.17■■■□□ 2.42
ATXN3-252ENST00000620536 USP44Q9H0E7 712 aa30.17■■■□□ 2.42
ATXN3-252ENST00000620536 JAG2Q9Y219 1238 aa30.17■■■□□ 2.42
ATXN3-252ENST00000620536 UBE2Q2LH0YL09 131 aa30.16■■■□□ 2.42
ATXN3-252ENST00000620536 GYG1P46976 350 aa30.16■■■□□ 2.42
ATXN3-252ENST00000620536 RASAL3Q86YV0 1011 aa30.16■■■□□ 2.42
ATXN3-252ENST00000620536 MTMR14Q8NCE2 650 aa30.16■■■□□ 2.42
ATXN3-252ENST00000620536 MYO1BO43795 1136 aa30.15■■■□□ 2.42
ATXN3-252ENST00000620536 CT47B1P0C2W7 299 aaPredicted RBP30.15■■■□□ 2.42
ATXN3-252ENST00000620536 REM2Q8IYK8 340 aaPredicted RBP30.15■■■□□ 2.42
ATXN3-252ENST00000620536 METTL24Q5JXM2 366 aa30.14■■■□□ 2.42
ATXN3-252ENST00000620536 TDRD7Q8NHU6 1098 aaKnown RBP30.14■■■□□ 2.42
ATXN3-252ENST00000620536 ABHD8Q96I13 439 aa30.14■■■□□ 2.42
ATXN3-252ENST00000620536 SAGE1Q9NXZ1 904 aa30.14■■■□□ 2.42
ATXN3-252ENST00000620536 CFAP100Q494V2 611 aa30.13■■■□□ 2.41
ATXN3-252ENST00000620536 LRRC24Q50LG9 513 aa30.13■■■□□ 2.41
ATXN3-252ENST00000620536 VPS37DQ86XT2 251 aa30.13■■■□□ 2.41
ATXN3-252ENST00000620536 FAM84BQ96KN1 310 aaPredicted RBP30.13■■■□□ 2.41
ATXN3-252ENST00000620536 CSRNP1Q96S65 589 aa30.13■■■□□ 2.41
ATXN3-252ENST00000620536 FAM205AQ6ZU69 1335 aa30.13■■■□□ 2.41
ATXN3-252ENST00000620536 RBM5P52756 815 aaKnown RBP eCLIP30.12■■■□□ 2.41
ATXN3-252ENST00000620536 ARMC9Q7Z3E5 817 aa30.11■■■□□ 2.41
ATXN3-252ENST00000620536 DEFB129Q9H1M3 183 aa30.11■■■□□ 2.41
ATXN3-252ENST00000620536 RNF186Q9NXI6 227 aa30.11■■■□□ 2.41
ATXN3-252ENST00000620536 TRPA1O75762 1119 aa30.1■■■□□ 2.41
ATXN3-252ENST00000620536 CAVIN4Q5BKX8 364 aa30.1■■■□□ 2.41
ATXN3-252ENST00000620536 MFSD14BQ5SR56 506 aa30.1■■■□□ 2.41
ATXN3-252ENST00000620536 PCDHAC2Q9Y5I4 1007 aa30.1■■■□□ 2.41
ATXN3-252ENST00000620536 COL1A1P02452 1464 aaPredicted RBP30.1■■■□□ 2.41
ATXN3-252ENST00000620536 SPDYE2BA6NHP3 402 aa30.09■■■□□ 2.41
ATXN3-252ENST00000620536 PDE8BO95263 885 aa30.09■■■□□ 2.41
ATXN3-252ENST00000620536 SPDYE6P0CI01 402 aa30.09■■■□□ 2.41
ATXN3-252ENST00000620536 PRKG1Q13976 671 aa30.09■■■□□ 2.41
ATXN3-252ENST00000620536 KLHDC4Q8TBB5 520 aa30.09■■■□□ 2.41
ATXN3-252ENST00000620536 PRMT6Q96LA8 375 aaPredicted RBP30.09■■■□□ 2.41
ATXN3-252ENST00000620536 NOB1Q9ULX3 412 aaKnown RBP30.09■■■□□ 2.41
ATXN3-252ENST00000620536 PPP2R3BQ9Y5P8 575 aa30.08■■■□□ 2.41
ATXN3-252ENST00000620536 CLRN2A0PK11 232 aa30.07■■■□□ 2.4
ATXN3-252ENST00000620536 FRAT2O75474 233 aaPredicted RBP30.07■■■□□ 2.4
ATXN3-252ENST00000620536 FBXO33Q7Z6M2 555 aa30.07■■■□□ 2.4
ATXN3-252ENST00000620536 API5Q9BZZ5 524 aaKnown RBP30.07■■■□□ 2.4
ATXN3-252ENST00000620536 VEZTQ9HBM0 779 aa30.07■■■□□ 2.4
ATXN3-252ENST00000620536 TTF2Q9UNY4 1162 aaKnown RBP30.07■■■□□ 2.4
ATXN3-252ENST00000620536 UBTFL1P0CB47 393 aaPredicted RBP30.05■■■□□ 2.4
ATXN3-252ENST00000620536 PTPN12Q05209 780 aaKnown RBP30.05■■■□□ 2.4
ATXN3-252ENST00000620536 VGLL2Q8N8G2 317 aa30.05■■■□□ 2.4
ATXN3-252ENST00000620536 SERPINA10Q9UK55 444 aa30.05■■■□□ 2.4
ATXN3-252ENST00000620536 ANGEL1Q9UNK9 670 aaKnown RBP30.05■■■□□ 2.4
ATXN3-252ENST00000620536 IQSEC3Q9UPP2 1182 aaPredicted RBP30.04■■■□□ 2.4
ATXN3-252ENST00000620536 CHAF1AQ13111 956 aaPredicted RBP30.03■■■□□ 2.4
ATXN3-252ENST00000620536 DGKZQ13574 1117 aa30.03■■■□□ 2.4
ATXN3-252ENST00000620536 PUM3Q15397 648 aaKnown RBP30.03■■■□□ 2.4
ATXN3-252ENST00000620536 SUPT20HL1Q3ZLR7 823 aa30.03■■■□□ 2.4
ATXN3-252ENST00000620536 MCOLN1Q9GZU1 580 aa30.03■■■□□ 2.4
ATXN3-252ENST00000620536 HDAC5Q9UQL6 1122 aa30.03■■■□□ 2.4
ATXN3-252ENST00000620536 EYA2O00167 538 aa30.02■■■□□ 2.4
ATXN3-252ENST00000620536 PPP1R12BO60237 982 aaPredicted RBP30.02■■■□□ 2.4
ATXN3-252ENST00000620536 IFIT1P09914 478 aaKnown RBP30.02■■■□□ 2.4
ATXN3-252ENST00000620536 CCDC85CA6NKD9 419 aa30.01■■■□□ 2.39
ATXN3-252ENST00000620536 RFX5P48382 616 aaPredicted RBP30.01■■■□□ 2.39
ATXN3-252ENST00000620536 MKRN3Q13064 507 aaKnown RBP30.01■■■□□ 2.39
ATXN3-252ENST00000620536 LDLRAD1Q5T700 205 aa30.01■■■□□ 2.39
ATXN3-252ENST00000620536 TBC1D22AQ8WUA7 517 aa30.01■■■□□ 2.39
ATXN3-252ENST00000620536 AOX1Q06278 1338 aa30■■■□□ 2.39
ATXN3-252ENST00000620536 BCAMP50895 628 aa30■■■□□ 2.39
ATXN3-252ENST00000620536 RARSP54136 660 aaKnown RBP30■■■□□ 2.39
ATXN3-252ENST00000620536 FZD1Q9UP38 647 aa30■■■□□ 2.39
ATXN3-252ENST00000620536 ECM29Q5VYK3 1845 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 AKAP11Q9UKA4 1901 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 CRKP46108 304 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 TNFAIP1Q13829 316 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 RASA3Q14644 834 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 ZNF70Q9UC06 446 aaPredicted RBP29.99■■■□□ 2.39
ATXN3-252ENST00000620536 CASP8AP2Q9UKL3 1982 aa29.99■■■□□ 2.39
ATXN3-252ENST00000620536 KIF16BQ96L93 1317 aa29.98■■■□□ 2.39
ATXN3-252ENST00000620536 TM4SF4P48230 202 aa29.98■■■□□ 2.39
ATXN3-252ENST00000620536 SREBF2Q12772 1141 aa29.98■■■□□ 2.39
ATXN3-252ENST00000620536 SPDYE2Q495Y8 402 aa29.98■■■□□ 2.39
ATXN3-252ENST00000620536 DZIP1LQ8IYY4 767 aaKnown RBP29.98■■■□□ 2.39
ATXN3-252ENST00000620536 SLC10A4Q96EP9 437 aa29.98■■■□□ 2.39
ATXN3-252ENST00000620536 TDRD3Q9H7E2 651 aaKnown RBP29.98■■■□□ 2.39
ATXN3-252ENST00000620536 SLC5A1P13866 664 aa29.97■■■□□ 2.39
ATXN3-252ENST00000620536 FGFR2P21802 821 aa29.97■■■□□ 2.39
ATXN3-252ENST00000620536 MAP3K11Q16584 847 aa29.97■■■□□ 2.39
ATXN3-252ENST00000620536 NBPF12Q5TAG4 269 aaPredicted RBP29.97■■■□□ 2.39
ATXN3-252ENST00000620536 LPIN2Q92539 896 aa29.97■■■□□ 2.39
ATXN3-252ENST00000620536 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.97■■■□□ 2.39
ATXN3-252ENST00000620536 ARHGAP45Q92619 1136 aa29.96■■■□□ 2.39
ATXN3-252ENST00000620536 SIL1Q9H173 461 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms