RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 DGKZQ13574 1117 aa15.01□□□□□ -0.01
UPF3B-204ENST00000619445 HELBQ8NG08 1087 aaPredicted RBP15.01□□□□□ -0.01
UPF3B-204ENST00000619445 MCOLN1Q9GZU1 580 aa15.01□□□□□ -0.01
UPF3B-204ENST00000619445 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
UPF3B-204ENST00000619445 CCDC85CA6NKD9 419 aa15□□□□□ -0.01
UPF3B-204ENST00000619445 SREBF2Q12772 1141 aa15□□□□□ -0.01
UPF3B-204ENST00000619445 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
UPF3B-204ENST00000619445 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
UPF3B-204ENST00000619445 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
UPF3B-204ENST00000619445 PPP1R12BO60237 982 aaPredicted RBP14.99□□□□□ -0.01
UPF3B-204ENST00000619445 PLIN1O60240 522 aa14.99□□□□□ -0.01
UPF3B-204ENST00000619445 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
UPF3B-204ENST00000619445 RABL6Q3YEC7 729 aaPredicted RBP14.99□□□□□ -0.01
UPF3B-204ENST00000619445 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
UPF3B-204ENST00000619445 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
UPF3B-204ENST00000619445 DEFB129Q9H1M3 183 aa14.99□□□□□ -0.01
UPF3B-204ENST00000619445 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 HIBADHP31937 336 aaKnown RBP14.98□□□□□ -0.01
UPF3B-204ENST00000619445 ALDH1L2Q3SY69 923 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 CERS5Q8N5B7 392 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 MRPL50Q8N5N7 158 aaKnown RBP14.98□□□□□ -0.01
UPF3B-204ENST00000619445 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
UPF3B-204ENST00000619445 SNAP23O00161 211 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 ALDH1A1P00352 501 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
UPF3B-204ENST00000619445 TM4SF4P48230 202 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 RGS19P49795 217 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 INHBEP58166 350 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 CFAP100Q494V2 611 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 PRAMEF18Q5VWM3 479 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 TDRD7Q8NHU6 1098 aaKnown RBP14.98□□□□□ -0.01
UPF3B-204ENST00000619445 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
UPF3B-204ENST00000619445 NBPF7P0C2Y1 421 aaPredicted RBP14.97□□□□□ -0.01
UPF3B-204ENST00000619445 PKN2Q16513 984 aaKnown RBP14.97□□□□□ -0.01
UPF3B-204ENST00000619445 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
UPF3B-204ENST00000619445 CAVIN4Q5BKX8 364 aa14.97□□□□□ -0.01
UPF3B-204ENST00000619445 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
UPF3B-204ENST00000619445 LDLRAD1Q5T700 205 aa14.97□□□□□ -0.01
UPF3B-204ENST00000619445 CTU1Q7Z7A3 348 aaKnown RBP14.97□□□□□ -0.01
UPF3B-204ENST00000619445 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
UPF3B-204ENST00000619445 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
UPF3B-204ENST00000619445 RIPOR2Q9Y4F9 1068 aa14.97□□□□□ -0.01
UPF3B-204ENST00000619445 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.02
UPF3B-204ENST00000619445 RBM5P52756 815 aaKnown RBP eCLIP14.96□□□□□ -0.02
UPF3B-204ENST00000619445 MLLT1Q03111 559 aaPredicted RBP14.96□□□□□ -0.02
UPF3B-204ENST00000619445 SLFN5Q08AF3 891 aa14.96□□□□□ -0.02
UPF3B-204ENST00000619445 MOB2Q70IA6 237 aa14.96□□□□□ -0.02
UPF3B-204ENST00000619445 KAZALD1Q96I82 304 aa14.96□□□□□ -0.02
UPF3B-204ENST00000619445 CFHR5Q9BXR6 569 aa14.96□□□□□ -0.02
UPF3B-204ENST00000619445 SCAF8Q9UPN6 1271 aaKnown RBP14.96□□□□□ -0.02
UPF3B-204ENST00000619445 ARAP2Q8WZ64 1704 aa14.95□□□□□ -0.02
UPF3B-204ENST00000619445 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
UPF3B-204ENST00000619445 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 F8W031 263 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 IREB2P48200 963 aaKnown RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 HDLBPQ00341 1268 aaKnown RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 PTPN12Q05209 780 aaKnown RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 METTL24Q5JXM2 366 aa14.95□□□□□ -0.02
UPF3B-204ENST00000619445 SSH1Q8WYL5 1049 aa14.95□□□□□ -0.02
UPF3B-204ENST00000619445 SLC10A4Q96EP9 437 aa14.95□□□□□ -0.02
UPF3B-204ENST00000619445 FAM84BQ96KN1 310 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-204ENST00000619445 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-204ENST00000619445 PDE8BO95263 885 aa14.94□□□□□ -0.02
UPF3B-204ENST00000619445 TNNI2P48788 182 aa14.94□□□□□ -0.02
UPF3B-204ENST00000619445 SPRYD7Q5W111 196 aa14.94□□□□□ -0.02
UPF3B-204ENST00000619445 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-204ENST00000619445 VEZTQ9HBM0 779 aa14.94□□□□□ -0.02
UPF3B-204ENST00000619445 TTF2Q9UNY4 1162 aaKnown RBP14.94□□□□□ -0.02
UPF3B-204ENST00000619445 SUGT1Q9Y2Z0 365 aa14.94□□□□□ -0.02
UPF3B-204ENST00000619445 GYG1P46976 350 aa14.93□□□□□ -0.02
UPF3B-204ENST00000619445 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
UPF3B-204ENST00000619445 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-204ENST00000619445 ANKRD44Q8N8A2 993 aa14.93□□□□□ -0.02
UPF3B-204ENST00000619445 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
UPF3B-204ENST00000619445 FBXO3Q9UK99 471 aa14.93□□□□□ -0.02
UPF3B-204ENST00000619445 MAST3O60307 1309 aa14.93□□□□□ -0.02
UPF3B-204ENST00000619445 LAMB1P07942 1786 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 CLRN2A0PK11 232 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
UPF3B-204ENST00000619445 PRKG1Q13976 671 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
UPF3B-204ENST00000619445 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 OTUD7BQ6GQQ9 843 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 MRIQ9BWK5 157 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 SMC4Q9NTJ3 1288 aa14.92□□□□□ -0.02
UPF3B-204ENST00000619445 PDE4DIPQ5VU43 2346 aa14.91□□□□□ -0.02
UPF3B-204ENST00000619445 RASA3Q14644 834 aa14.91□□□□□ -0.02
UPF3B-204ENST00000619445 DZIP1LQ8IYY4 767 aaKnown RBP14.91□□□□□ -0.02
UPF3B-204ENST00000619445 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
UPF3B-204ENST00000619445 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
UPF3B-204ENST00000619445 GPR25O00155 361 aa14.9□□□□□ -0.02
UPF3B-204ENST00000619445 VGLL2Q8N8G2 317 aa14.9□□□□□ -0.02
UPF3B-204ENST00000619445 ZNF296Q8WUU4 475 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms