RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 HDAC9Q9UKV0 1011 aa27.41■■□□□ 1.98
TRAF4-217ENST00000618771 PITPNM2Q9BZ72 1349 aa27.41■■□□□ 1.98
TRAF4-217ENST00000618771 ECM29Q5VYK3 1845 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 LRRC24Q50LG9 513 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 RGMBQ6NW40 437 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 C2orf69Q8N8R5 385 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 KLHDC4Q8TBB5 520 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 ARHGAP45Q92619 1136 aa27.4■■□□□ 1.98
TRAF4-217ENST00000618771 DGKZQ13574 1117 aa27.39■■□□□ 1.98
TRAF4-217ENST00000618771 NBPF9Q3BBW0 867 aa27.39■■□□□ 1.98
TRAF4-217ENST00000618771 METTL24Q5JXM2 366 aa27.39■■□□□ 1.98
TRAF4-217ENST00000618771 ARAP2Q8WZ64 1704 aa27.38■■□□□ 1.97
TRAF4-217ENST00000618771 WNT10BO00744 389 aa27.38■■□□□ 1.97
TRAF4-217ENST00000618771 RGS19P49795 217 aa27.38■■□□□ 1.97
TRAF4-217ENST00000618771 CERS5Q8N5B7 392 aa27.38■■□□□ 1.97
TRAF4-217ENST00000618771 FAM155AB1AL88 458 aaPredicted RBP27.37■■□□□ 1.97
TRAF4-217ENST00000618771 GYG1P46976 350 aa27.37■■□□□ 1.97
TRAF4-217ENST00000618771 CDCA5Q96FF9 252 aa27.37■■□□□ 1.97
TRAF4-217ENST00000618771 HDAC5Q9UQL6 1122 aa27.37■■□□□ 1.97
TRAF4-217ENST00000618771 SASH1O94885 1247 aa27.36■■□□□ 1.97
TRAF4-217ENST00000618771 HIBADHP31937 336 aaKnown RBP27.36■■□□□ 1.97
TRAF4-217ENST00000618771 RFX5P48382 616 aaPredicted RBP27.36■■□□□ 1.97
TRAF4-217ENST00000618771 FKBP1AP62942 108 aaKnown RBP27.36■■□□□ 1.97
TRAF4-217ENST00000618771 VGLL2Q8N8G2 317 aa27.36■■□□□ 1.97
TRAF4-217ENST00000618771 JAG2Q9Y219 1238 aa27.36■■□□□ 1.97
TRAF4-217ENST00000618771 IPO8O15397 1037 aaKnown RBP27.35■■□□□ 1.97
TRAF4-217ENST00000618771 PDE8BO95263 885 aa27.35■■□□□ 1.97
TRAF4-217ENST00000618771 ZNF157P51786 506 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-217ENST00000618771 INTS3Q68E01 1043 aaKnown RBP27.35■■□□□ 1.97
TRAF4-217ENST00000618771 TDRD7Q8NHU6 1098 aaKnown RBP27.35■■□□□ 1.97
TRAF4-217ENST00000618771 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
TRAF4-217ENST00000618771 FAM84BQ96KN1 310 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-217ENST00000618771 MYH13Q9UKX3 1938 aa27.35■■□□□ 1.97
TRAF4-217ENST00000618771 BCAR3O75815 825 aa27.34■■□□□ 1.97
TRAF4-217ENST00000618771 KIF23Q02241 960 aaPredicted RBP27.34■■□□□ 1.97
TRAF4-217ENST00000618771 MEIS3Q99687 375 aa27.34■■□□□ 1.97
TRAF4-217ENST00000618771 SCAF8Q9UPN6 1271 aaKnown RBP27.34■■□□□ 1.97
TRAF4-217ENST00000618771 LRRFIP2Q9Y608 721 aaKnown RBP27.34■■□□□ 1.97
TRAF4-217ENST00000618771 FAM205AQ6ZU69 1335 aa27.34■■□□□ 1.97
TRAF4-217ENST00000618771 PAPPA2Q9BXP8 1791 aa27.33■■□□□ 1.97
TRAF4-217ENST00000618771 EYA2O00167 538 aa27.33■■□□□ 1.97
TRAF4-217ENST00000618771 PTPN12Q05209 780 aaKnown RBP27.33■■□□□ 1.97
TRAF4-217ENST00000618771 F8W031 263 aaPredicted RBP27.32■■□□□ 1.96
TRAF4-217ENST00000618771 TRIM27P14373 513 aa27.32■■□□□ 1.96
TRAF4-217ENST00000618771 ATF7IPQ6VMQ6 1270 aa27.32■■□□□ 1.96
TRAF4-217ENST00000618771 VPS37DQ86XT2 251 aa27.32■■□□□ 1.96
TRAF4-217ENST00000618771 FRAT1Q92837 279 aaPredicted RBP27.32■■□□□ 1.96
TRAF4-217ENST00000618771 ZBED3Q96IU2 234 aaPredicted RBP27.32■■□□□ 1.96
TRAF4-217ENST00000618771 DLGAP5Q15398 846 aa27.31■■□□□ 1.96
TRAF4-217ENST00000618771 PUM3Q15397 648 aaKnown RBP27.3■■□□□ 1.96
TRAF4-217ENST00000618771 CAVIN4Q5BKX8 364 aa27.3■■□□□ 1.96
TRAF4-217ENST00000618771 MFSD14BQ5SR56 506 aa27.3■■□□□ 1.96
TRAF4-217ENST00000618771 FBXO33Q7Z6M2 555 aa27.3■■□□□ 1.96
TRAF4-217ENST00000618771 ZBED9Q6R2W3 1325 aa27.3■■□□□ 1.96
TRAF4-217ENST00000618771 APOBEC3FQ8IUX4 373 aaKnown RBP27.29■■□□□ 1.96
TRAF4-217ENST00000618771 SAGE1Q9NXZ1 904 aa27.29■■□□□ 1.96
TRAF4-217ENST00000618771 AKAP11Q9UKA4 1901 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 TRPA1O75762 1119 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 GNAI3P08754 354 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 SLC10A3P09131 477 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 ATG9AQ7Z3C6 839 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 MTMR14Q8NCE2 650 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 SIL1Q9H173 461 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 RNF186Q9NXI6 227 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 FBXO3Q9UK99 471 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 TNNQ9UQP3 1299 aa27.28■■□□□ 1.96
TRAF4-217ENST00000618771 IFIT1P09914 478 aaKnown RBP27.27■■□□□ 1.96
TRAF4-217ENST00000618771 FGFR2P21802 821 aa27.27■■□□□ 1.96
TRAF4-217ENST00000618771 CFAP100Q494V2 611 aa27.27■■□□□ 1.96
TRAF4-217ENST00000618771 PRAMEF18Q5VWM3 479 aa27.27■■□□□ 1.96
TRAF4-217ENST00000618771 CLUAP1Q96AJ1 413 aa27.27■■□□□ 1.96
TRAF4-217ENST00000618771 IQSEC3Q9UPP2 1182 aaPredicted RBP27.27■■□□□ 1.96
TRAF4-217ENST00000618771 CIAO1O76071 339 aa27.26■■□□□ 1.95
TRAF4-217ENST00000618771 FKBP1BP68106 108 aa27.26■■□□□ 1.95
TRAF4-217ENST00000618771 PCDHAC2Q9Y5I4 1007 aa27.26■■□□□ 1.95
TRAF4-217ENST00000618771 FRAT2O75474 233 aaPredicted RBP27.25■■□□□ 1.95
TRAF4-217ENST00000618771 SLC34A2O95436 690 aa27.25■■□□□ 1.95
TRAF4-217ENST00000618771 SLC5A1P13866 664 aa27.25■■□□□ 1.95
TRAF4-217ENST00000618771 ZKSCAN2Q63HK3 967 aa27.25■■□□□ 1.95
TRAF4-217ENST00000618771 CSRNP1Q96S65 589 aa27.25■■□□□ 1.95
TRAF4-217ENST00000618771 TTF2Q9UNY4 1162 aaKnown RBP27.25■■□□□ 1.95
TRAF4-217ENST00000618771 COL1A1P02452 1464 aaPredicted RBP27.25■■□□□ 1.95
TRAF4-217ENST00000618771 SPDYE2BA6NHP3 402 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 MYO1BO43795 1136 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 SPDYE6P0CI01 402 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 NF2P35240 595 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 BCAMP50895 628 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 RBM5P52756 815 aaKnown RBP eCLIP27.24■■□□□ 1.958e-14■■■■□ 26.3
TRAF4-217ENST00000618771 CHAF1AQ13111 956 aaPredicted RBP27.24■■□□□ 1.95
TRAF4-217ENST00000618771 LPIN2Q92539 896 aa27.24■■□□□ 1.95
TRAF4-217ENST00000618771 PA2G4Q9UQ80 394 aaKnown RBP27.23■■□□□ 1.95
TRAF4-217ENST00000618771 RASAL3Q86YV0 1011 aa27.22■■□□□ 1.95
TRAF4-217ENST00000618771 PRMT6Q96LA8 375 aaPredicted RBP27.22■■□□□ 1.95
TRAF4-217ENST00000618771 COPRSQ9NQ92 184 aa27.22■■□□□ 1.95
TRAF4-217ENST00000618771 CEP126Q9P2H0 1117 aa27.22■■□□□ 1.95
TRAF4-217ENST00000618771 TNRC18O15417 2968 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-217ENST00000618771 CLRN2A0PK11 232 aa27.21■■□□□ 1.95
TRAF4-217ENST00000618771 IL15P40933 162 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-217ENST00000618771 TTLL12Q14166 644 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-217ENST00000618771 MOB2Q70IA6 237 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms