RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MROH5Q6ZUA9 1318 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 IRS2Q9Y4H2 1338 aa20■□□□□ 0.79
BRCA1-228ENST00000618469 LRRC24Q50LG9 513 aa19.99■□□□□ 0.79
BRCA1-228ENST00000618469 HDAC5Q9UQL6 1122 aa19.99■□□□□ 0.79
BRCA1-228ENST00000618469 GNAI3P08754 354 aa19.98■□□□□ 0.79
BRCA1-228ENST00000618469 METTL24Q5JXM2 366 aa19.98■□□□□ 0.79
BRCA1-228ENST00000618469 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
BRCA1-228ENST00000618469 C2orf69Q8N8R5 385 aa19.98■□□□□ 0.79
BRCA1-228ENST00000618469 RIPOR2Q9Y4F9 1068 aa19.98■□□□□ 0.79
BRCA1-228ENST00000618469 RFX5P48382 616 aaPredicted RBP19.97■□□□□ 0.79
BRCA1-228ENST00000618469 C15orf52Q6ZUT6 534 aaKnown RBP19.97■□□□□ 0.79
BRCA1-228ENST00000618469 ZNF804AQ7Z570 1209 aa19.97■□□□□ 0.79
BRCA1-228ENST00000618469 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
BRCA1-228ENST00000618469 AGBL3Q8NEM8 1001 aa19.97■□□□□ 0.79
BRCA1-228ENST00000618469 DCPSQ96C86 337 aaKnown RBP19.97■□□□□ 0.79
BRCA1-228ENST00000618469 DACT2Q5SW24 774 aa19.96■□□□□ 0.79
BRCA1-228ENST00000618469 MXD3Q9BW11 206 aa19.96■□□□□ 0.79
BRCA1-228ENST00000618469 CD209Q9NNX6 404 aa19.96■□□□□ 0.79
BRCA1-228ENST00000618469 ARAP2Q8WZ64 1704 aa19.96■□□□□ 0.79
BRCA1-228ENST00000618469 PTPN12Q05209 780 aaKnown RBP19.95■□□□□ 0.78
BRCA1-228ENST00000618469 UBE4AQ14139 1066 aa19.95■□□□□ 0.78
BRCA1-228ENST00000618469 KIF4BQ2VIQ3 1234 aa19.95■□□□□ 0.78
BRCA1-228ENST00000618469 STRIP1Q5VSL9 837 aa19.95■□□□□ 0.78
BRCA1-228ENST00000618469 CSRNP1Q96S65 589 aa19.95■□□□□ 0.78
BRCA1-228ENST00000618469 SCAF8Q9UPN6 1271 aaKnown RBP19.95■□□□□ 0.78
BRCA1-228ENST00000618469 MYO3BQ8WXR4 1341 aa19.95■□□□□ 0.78
BRCA1-228ENST00000618469 EYA2O00167 538 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 GTF2IP78347 998 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 VGLL2Q8N8G2 317 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 CCDC102AQ96A19 550 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 GMLQ99445 158 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 SIL1Q9H173 461 aa19.94■□□□□ 0.78
BRCA1-228ENST00000618469 USP17L8P0C7I0 530 aa19.93■□□□□ 0.78
BRCA1-228ENST00000618469 TTLL5Q6EMB2 1281 aa19.93■□□□□ 0.78
BRCA1-228ENST00000618469 ITPRIPQ8IWB1 547 aa19.93■□□□□ 0.78
BRCA1-228ENST00000618469 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
BRCA1-228ENST00000618469 SAGE1Q9NXZ1 904 aa19.93■□□□□ 0.78
BRCA1-228ENST00000618469 GGA3Q9NZ52 723 aa19.93■□□□□ 0.78
BRCA1-228ENST00000618469 PDE8BO95263 885 aa19.92■□□□□ 0.78
BRCA1-228ENST00000618469 SLC10A3P09131 477 aa19.92■□□□□ 0.78
BRCA1-228ENST00000618469 RLBP1P12271 317 aa19.92■□□□□ 0.78
BRCA1-228ENST00000618469 GYG1P46976 350 aa19.92■□□□□ 0.78
BRCA1-228ENST00000618469 ZNF280AP59817 542 aaPredicted RBP19.92■□□□□ 0.78
BRCA1-228ENST00000618469 GNAI2P04899 355 aa19.91■□□□□ 0.78
BRCA1-228ENST00000618469 IL1R1P14778 569 aa19.91■□□□□ 0.78
BRCA1-228ENST00000618469 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
BRCA1-228ENST00000618469 CDCA5Q96FF9 252 aa19.91■□□□□ 0.78
BRCA1-228ENST00000618469 PA2G4Q9UQ80 394 aaKnown RBP19.91■□□□□ 0.78
BRCA1-228ENST00000618469 JAG2Q9Y219 1238 aa19.91■□□□□ 0.78
BRCA1-228ENST00000618469 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 MOB2Q70IA6 237 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 ATG9AQ7Z3C6 839 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 CTU1Q7Z7A3 348 aaKnown RBP19.9■□□□□ 0.78
BRCA1-228ENST00000618469 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
BRCA1-228ENST00000618469 CIAO1O76071 339 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 HIBADHP31937 336 aaKnown RBP19.89■□□□□ 0.77
BRCA1-228ENST00000618469 MTX1Q13505 466 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 VPS37DQ86XT2 251 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 KIAA0825Q8IV33 1275 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 OGFOD1Q8N543 542 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 HPS5Q9UPZ3 1129 aa19.89■□□□□ 0.77
BRCA1-228ENST00000618469 RASAL3Q86YV0 1011 aa19.88■□□□□ 0.77
BRCA1-228ENST00000618469 CERS5Q8N5B7 392 aa19.88■□□□□ 0.77
BRCA1-228ENST00000618469 FAM84BQ96KN1 310 aaPredicted RBP19.88■□□□□ 0.77
BRCA1-228ENST00000618469 COPRSQ9NQ92 184 aa19.88■□□□□ 0.77
BRCA1-228ENST00000618469 TBC1D8O95759 1140 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
BRCA1-228ENST00000618469 SLC5A1P13866 664 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 IL15P40933 162 aaPredicted RBP19.87■□□□□ 0.77
BRCA1-228ENST00000618469 SCARF1Q14162 830 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 CAVIN4Q5BKX8 364 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 ANGEL2Q5VTE6 544 aaKnown RBP19.87■□□□□ 0.77
BRCA1-228ENST00000618469 PRPF38BQ5VTL8 546 aaKnown RBP19.87■□□□□ 0.77
BRCA1-228ENST00000618469 PRAMEF18Q5VWM3 479 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 HDAC9Q9UKV0 1011 aa19.87■□□□□ 0.77
BRCA1-228ENST00000618469 IQSEC3Q9UPP2 1182 aaPredicted RBP19.87■□□□□ 0.77
BRCA1-228ENST00000618469 SASH1O94885 1247 aa19.86■□□□□ 0.77
BRCA1-228ENST00000618469 FGFR2P21802 821 aa19.86■□□□□ 0.77
BRCA1-228ENST00000618469 MKRN3Q13064 507 aaKnown RBP19.86■□□□□ 0.77
BRCA1-228ENST00000618469 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
BRCA1-228ENST00000618469 CEP126Q9P2H0 1117 aa19.86■□□□□ 0.77
BRCA1-228ENST00000618469 ECM29Q5VYK3 1845 aa19.86■□□□□ 0.77
BRCA1-228ENST00000618469 FAM205AQ6ZU69 1335 aa19.85■□□□□ 0.77
BRCA1-228ENST00000618469 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
BRCA1-228ENST00000618469 F8W031 263 aaPredicted RBP19.85■□□□□ 0.77
BRCA1-228ENST00000618469 ATP2B3Q16720 1220 aa19.85■□□□□ 0.77
BRCA1-228ENST00000618469 FBXO33Q7Z6M2 555 aa19.85■□□□□ 0.77
BRCA1-228ENST00000618469 LPIN2Q92539 896 aa19.85■□□□□ 0.77
BRCA1-228ENST00000618469 YTHDC1Q96MU7 727 aaKnown RBP19.85■□□□□ 0.77
BRCA1-228ENST00000618469 UBE2Q2LH0YL09 131 aa19.84■□□□□ 0.77
BRCA1-228ENST00000618469 FRAT2O75474 233 aaPredicted RBP19.84■□□□□ 0.77
BRCA1-228ENST00000618469 FKBP1AP62942 108 aaKnown RBP19.84■□□□□ 0.77
BRCA1-228ENST00000618469 CHAF1AQ13111 956 aaPredicted RBP19.84■□□□□ 0.77
BRCA1-228ENST00000618469 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms