RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 SASH1O94885 1247 aa27.68■■■□□ 2.02
SYNGR3-206ENST00000618464 IL1R1P14778 569 aa27.68■■■□□ 2.02
SYNGR3-206ENST00000618464 UBE4AQ14139 1066 aa27.68■■■□□ 2.02
SYNGR3-206ENST00000618464 METTL24Q5JXM2 366 aa27.68■■■□□ 2.02
SYNGR3-206ENST00000618464 CERS5Q8N5B7 392 aa27.68■■■□□ 2.02
SYNGR3-206ENST00000618464 UBTFL1P0CB47 393 aaPredicted RBP27.67■■■□□ 2.02
SYNGR3-206ENST00000618464 GYG1P46976 350 aa27.67■■■□□ 2.02
SYNGR3-206ENST00000618464 HDAC9Q9UKV0 1011 aa27.67■■■□□ 2.02
SYNGR3-206ENST00000618464 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
SYNGR3-206ENST00000618464 WNT10BO00744 389 aa27.66■■■□□ 2.02
SYNGR3-206ENST00000618464 ZNF157P51786 506 aaPredicted RBP27.66■■■□□ 2.02
SYNGR3-206ENST00000618464 PITPNM2Q9BZ72 1349 aa27.66■■■□□ 2.02
SYNGR3-206ENST00000618464 F8W031 263 aaPredicted RBP27.65■■■□□ 2.02
SYNGR3-206ENST00000618464 KIF23Q02241 960 aaPredicted RBP27.64■■■□□ 2.02
SYNGR3-206ENST00000618464 CCDC102AQ96A19 550 aa27.64■■■□□ 2.02
SYNGR3-206ENST00000618464 HIBADHP31937 336 aaKnown RBP27.63■■■□□ 2.01
SYNGR3-206ENST00000618464 FAM84BQ96KN1 310 aaPredicted RBP27.63■■■□□ 2.01
SYNGR3-206ENST00000618464 CASP8AP2Q9UKL3 1982 aa27.62■■■□□ 2.01
SYNGR3-206ENST00000618464 RFX5P48382 616 aaPredicted RBP27.62■■■□□ 2.01
SYNGR3-206ENST00000618464 MMP14P50281 582 aa27.62■■■□□ 2.01
SYNGR3-206ENST00000618464 PRAMEF18Q5VWM3 479 aa27.62■■■□□ 2.01
SYNGR3-206ENST00000618464 BCAR3O75815 825 aa27.61■■■□□ 2.01
SYNGR3-206ENST00000618464 VGLL2Q8N8G2 317 aa27.61■■■□□ 2.01
SYNGR3-206ENST00000618464 TDRD7Q8NHU6 1098 aaKnown RBP27.61■■■□□ 2.01
SYNGR3-206ENST00000618464 MEIS3Q99687 375 aa27.61■■■□□ 2.01
SYNGR3-206ENST00000618464 LRRFIP2Q9Y608 721 aaKnown RBP27.61■■■□□ 2.01
SYNGR3-206ENST00000618464 PDE8BO95263 885 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 SLC10A3P09131 477 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 DLGAP5Q15398 846 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 VPS37DQ86XT2 251 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 FRAT1Q92837 279 aaPredicted RBP27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 IQSEC3Q9UPP2 1182 aaPredicted RBP27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 PCDHAC2Q9Y5I4 1007 aa27.6■■■□□ 2.01
SYNGR3-206ENST00000618464 CCDC85CA6NKD9 419 aa27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 FKBP1AP62942 108 aaKnown RBP27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 PTPN12Q05209 780 aaKnown RBP27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 ZBED3Q96IU2 234 aaPredicted RBP27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 MCOLN1Q9GZU1 580 aa27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 TNNQ9UQP3 1299 aa27.59■■■□□ 2.01
SYNGR3-206ENST00000618464 EYA2O00167 538 aa27.58■■■□□ 2.01
SYNGR3-206ENST00000618464 MOB2Q70IA6 237 aa27.58■■■□□ 2.01
SYNGR3-206ENST00000618464 SIL1Q9H173 461 aa27.58■■■□□ 2.01
SYNGR3-206ENST00000618464 FAM205AQ6ZU69 1335 aa27.58■■■□□ 2.01
SYNGR3-206ENST00000618464 IPO8O15397 1037 aaKnown RBP27.57■■■□□ 2
SYNGR3-206ENST00000618464 MFSD14BQ5SR56 506 aa27.57■■■□□ 2
SYNGR3-206ENST00000618464 INTS3Q68E01 1043 aaKnown RBP27.57■■■□□ 2
SYNGR3-206ENST00000618464 FBXO33Q7Z6M2 555 aa27.57■■■□□ 2
SYNGR3-206ENST00000618464 CSRNP1Q96S65 589 aa27.57■■■□□ 2
SYNGR3-206ENST00000618464 TRIM27P14373 513 aa27.56■■■□□ 2
SYNGR3-206ENST00000618464 CFAP100Q494V2 611 aa27.56■■■□□ 2
SYNGR3-206ENST00000618464 CAVIN4Q5BKX8 364 aa27.56■■■□□ 2
SYNGR3-206ENST00000618464 APOBEC3FQ8IUX4 373 aaKnown RBP27.56■■■□□ 2
SYNGR3-206ENST00000618464 RNF186Q9NXI6 227 aa27.56■■■□□ 2
SYNGR3-206ENST00000618464 TRPA1O75762 1119 aa27.55■■■□□ 2
SYNGR3-206ENST00000618464 RBM5P52756 815 aaKnown RBP eCLIP27.55■■■□□ 2
SYNGR3-206ENST00000618464 FKBP1BP68106 108 aa27.55■■■□□ 2
SYNGR3-206ENST00000618464 CHAF1AQ13111 956 aaPredicted RBP27.55■■■□□ 2
SYNGR3-206ENST00000618464 PUM3Q15397 648 aaKnown RBP27.55■■■□□ 2
SYNGR3-206ENST00000618464 RASAL3Q86YV0 1011 aa27.55■■■□□ 2
SYNGR3-206ENST00000618464 HDAC5Q9UQL6 1122 aa27.55■■■□□ 2
SYNGR3-206ENST00000618464 PAPPA2Q9BXP8 1791 aa27.55■■■□□ 2
SYNGR3-206ENST00000618464 FRAT2O75474 233 aaPredicted RBP27.54■■■□□ 2
SYNGR3-206ENST00000618464 BCAMP50895 628 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 DGKZQ13574 1117 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 ATF7IPQ6VMQ6 1270 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 ATG9AQ7Z3C6 839 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 MTMR14Q8NCE2 650 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 CLUAP1Q96AJ1 413 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 SAGE1Q9NXZ1 904 aa27.54■■■□□ 2
SYNGR3-206ENST00000618464 CLRN2A0PK11 232 aa27.53■■■□□ 2
SYNGR3-206ENST00000618464 UBE2Q2LH0YL09 131 aa27.53■■■□□ 2
SYNGR3-206ENST00000618464 IFIT1P09914 478 aaKnown RBP27.53■■■□□ 2
SYNGR3-206ENST00000618464 FGFR2P21802 821 aa27.53■■■□□ 2
SYNGR3-206ENST00000618464 TTLL12Q14166 644 aaPredicted RBP27.53■■■□□ 2
SYNGR3-206ENST00000618464 TTF2Q9UNY4 1162 aaKnown RBP27.53■■■□□ 2
SYNGR3-206ENST00000618464 PA2G4Q9UQ80 394 aaKnown RBP27.53■■■□□ 2
SYNGR3-206ENST00000618464 AOX1Q06278 1338 aa27.52■■■□□ 2
SYNGR3-206ENST00000618464 SPDYE2BA6NHP3 402 aa27.52■■■□□ 2
SYNGR3-206ENST00000618464 SPDYE6P0CI01 402 aa27.52■■■□□ 2
SYNGR3-206ENST00000618464 PRMT6Q96LA8 375 aaPredicted RBP27.52■■■□□ 2
SYNGR3-206ENST00000618464 GNAI3P08754 354 aa27.51■■□□□ 1.99
SYNGR3-206ENST00000618464 SLC5A1P13866 664 aa27.51■■□□□ 1.99
SYNGR3-206ENST00000618464 ARAP2Q8WZ64 1704 aa27.5■■□□□ 1.99
SYNGR3-206ENST00000618464 MYO1BO43795 1136 aa27.5■■□□□ 1.99
SYNGR3-206ENST00000618464 NF2P35240 595 aa27.5■■□□□ 1.99
SYNGR3-206ENST00000618464 VEZTQ9HBM0 779 aa27.5■■□□□ 1.99
SYNGR3-206ENST00000618464 ECM29Q5VYK3 1845 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 CIAO1O76071 339 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 PRKG1Q13976 671 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 GRIK5Q16478 980 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 LPIN2Q92539 896 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 DEFB129Q9H1M3 183 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 AKAP11Q9UKA4 1901 aa27.49■■□□□ 1.99
SYNGR3-206ENST00000618464 ZBED9Q6R2W3 1325 aa27.48■■□□□ 1.99
SYNGR3-206ENST00000618464 CEP126Q9P2H0 1117 aa27.48■■□□□ 1.99
SYNGR3-206ENST00000618464 FBXO3Q9UK99 471 aa27.48■■□□□ 1.99
SYNGR3-206ENST00000618464 ATP2B3Q16720 1220 aa27.47■■□□□ 1.99
SYNGR3-206ENST00000618464 ZKSCAN2Q63HK3 967 aa27.47■■□□□ 1.99
SYNGR3-206ENST00000618464 REM2Q8IYK8 340 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms