RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TTC39AQ5SRH9 613 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 ECHDC1Q9NTX5 307 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 STAP2Q9UGK3 403 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 ATP5JP18859 108 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 MX1P20591 662 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 GTF2IP78347 998 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 STRIP1Q5VSL9 837 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 HMG20BQ9P0W2 317 aa27.74■■■□□ 2.03
CBWD3-213ENST00000618217 PDS5AQ29RF7 1337 aaKnown RBP27.73■■■□□ 2.03
CBWD3-213ENST00000618217 USP17L3A6NCW0 530 aa27.73■■■□□ 2.03
CBWD3-213ENST00000618217 USP17L4A6NCW7 530 aa27.73■■■□□ 2.03
CBWD3-213ENST00000618217 EIF6P56537 245 aaKnown RBP27.73■■■□□ 2.03
CBWD3-213ENST00000618217 TTLL5Q6EMB2 1281 aa27.73■■■□□ 2.03
CBWD3-213ENST00000618217 USP17L1Q7RTZ2 530 aa27.73■■■□□ 2.03
CBWD3-213ENST00000618217 DENND2AQ9ULE3 1009 aa27.73■■■□□ 2.03
CBWD3-213ENST00000618217 TTC41PQ6P2S7 1318 aa27.72■■■□□ 2.03
CBWD3-213ENST00000618217 VIL1P09327 827 aaKnown RBP27.72■■■□□ 2.03
CBWD3-213ENST00000618217 DACT2Q5SW24 774 aa27.72■■■□□ 2.03
CBWD3-213ENST00000618217 PI16Q6UXB8 463 aa27.72■■■□□ 2.03
CBWD3-213ENST00000618217 PLEKHM2Q8IWE5 1019 aa27.72■■■□□ 2.03
CBWD3-213ENST00000618217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.72■■■□□ 2.03
CBWD3-213ENST00000618217 PSMD14O00487 310 aa27.71■■■□□ 2.03
CBWD3-213ENST00000618217 FRAT2O75474 233 aaPredicted RBP27.71■■■□□ 2.03
CBWD3-213ENST00000618217 PDE1AP54750 535 aa27.71■■■□□ 2.03
CBWD3-213ENST00000618217 TSHZ3Q63HK5 1081 aa27.71■■■□□ 2.03
CBWD3-213ENST00000618217 CIAPIN1Q6FI81 312 aa27.71■■■□□ 2.03
CBWD3-213ENST00000618217 SPATA5Q8NB90 893 aa27.71■■■□□ 2.03
CBWD3-213ENST00000618217 PI4K2BQ8TCG2 481 aa27.7■■■□□ 2.03
CBWD3-213ENST00000618217 JAG2Q9Y219 1238 aa27.7■■■□□ 2.03
CBWD3-213ENST00000618217 TNIP1Q15025 636 aa27.7■■■□□ 2.02
CBWD3-213ENST00000618217 GPATCH3Q96I76 525 aa27.7■■■□□ 2.02
CBWD3-213ENST00000618217 CHAF1AQ13111 956 aaPredicted RBP27.69■■■□□ 2.02
CBWD3-213ENST00000618217 CERS5Q8N5B7 392 aa27.69■■■□□ 2.02
CBWD3-213ENST00000618217 OSBPL3Q9H4L5 887 aa27.69■■■□□ 2.02
CBWD3-213ENST00000618217 SNRKQ9NRH2 765 aa27.69■■■□□ 2.02
CBWD3-213ENST00000618217 FKBP1AP62942 108 aaKnown RBP27.68■■■□□ 2.02
CBWD3-213ENST00000618217 GPC2Q8N158 579 aa27.68■■■□□ 2.02
CBWD3-213ENST00000618217 GMLQ99445 158 aa27.68■■■□□ 2.02
CBWD3-213ENST00000618217 MXD3Q9BW11 206 aa27.68■■■□□ 2.02
CBWD3-213ENST00000618217 WDR66Q8TBY9 1149 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 SALL1Q9NSC2 1324 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 ZAP70P43403 619 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 RSBN1LQ6PCB5 846 aaPredicted RBP27.67■■■□□ 2.02
CBWD3-213ENST00000618217 SKAP1Q86WV1 359 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 HAUS7Q99871 368 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 BOLA2Q9H3K6 86 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 NDUFB9Q9Y6M9 179 aa27.67■■■□□ 2.02
CBWD3-213ENST00000618217 MYO5AQ9Y4I1 1855 aaKnown RBP27.66■■■□□ 2.02
CBWD3-213ENST00000618217 CYP2E1P05181 493 aaPredicted RBP27.66■■■□□ 2.02
CBWD3-213ENST00000618217 MFSD14BQ5SR56 506 aa27.66■■■□□ 2.02
CBWD3-213ENST00000618217 TBC1D22AQ8WUA7 517 aa27.66■■■□□ 2.02
CBWD3-213ENST00000618217 FBXW7Q969H0 707 aa27.66■■■□□ 2.02
CBWD3-213ENST00000618217 AOX1Q06278 1338 aa27.66■■■□□ 2.02
CBWD3-213ENST00000618217 GLTPD2A6NH11 291 aa27.65■■■□□ 2.02
CBWD3-213ENST00000618217 GLRX3O76003 335 aaKnown RBP27.65■■■□□ 2.02
CBWD3-213ENST00000618217 DDNO94850 711 aaPredicted RBP27.65■■■□□ 2.02
CBWD3-213ENST00000618217 ZBTB12Q9Y330 459 aaPredicted RBP27.65■■■□□ 2.02
CBWD3-213ENST00000618217 ERC2O15083 957 aa27.64■■■□□ 2.02
CBWD3-213ENST00000618217 GJA3Q9Y6H8 435 aa27.64■■■□□ 2.02
CBWD3-213ENST00000618217 GRIK5Q16478 980 aa27.63■■■□□ 2.01
CBWD3-213ENST00000618217 DPY19L2Q6NUT2 758 aa27.63■■■□□ 2.01
CBWD3-213ENST00000618217 TBC1D9Q6ZT07 1266 aa27.63■■■□□ 2.01
CBWD3-213ENST00000618217 AGBL3Q8NEM8 1001 aa27.63■■■□□ 2.01
CBWD3-213ENST00000618217 ANTXR1Q9H6X2 564 aa27.62■■■□□ 2.01
CBWD3-213ENST00000618217 MYO3BQ8WXR4 1341 aa27.62■■■□□ 2.01
CBWD3-213ENST00000618217 RPS12P25398 132 aaKnown RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 GMPSP49915 693 aaPredicted RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 DOCK2Q92608 1830 aa27.61■■■□□ 2.01
CBWD3-213ENST00000618217 DPF2Q92785 391 aa27.61■■■□□ 2.01
CBWD3-213ENST00000618217 EDC3Q96F86 508 aaKnown RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 L3MBTL3Q96JM7 780 aaPredicted RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 DNAJC2Q99543 621 aaKnown RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 PIH1D3Q9NQM4 214 aaKnown RBP27.61■■■□□ 2.01
CBWD3-213ENST00000618217 SUGT1Q9Y2Z0 365 aa27.6■■■□□ 2.01
CBWD3-213ENST00000618217 PRDX5P30044 214 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 SCNN1DP51172 638 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 PAG1Q9NWQ8 432 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 WDR90Q96KV7 1748 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 GOLIM4O00461 696 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 ZGPATQ8N5A5 531 aaKnown RBP27.59■■■□□ 2.01
CBWD3-213ENST00000618217 ABCF2Q9UG63 623 aa27.59■■■□□ 2.01
CBWD3-213ENST00000618217 KIAA0825Q8IV33 1275 aa27.57■■■□□ 2
CBWD3-213ENST00000618217 LDHBP07195 334 aaKnown RBP27.56■■■□□ 2
CBWD3-213ENST00000618217 TTF1Q15361 905 aaPredicted RBP27.56■■■□□ 2
CBWD3-213ENST00000618217 SPTY2D1Q68D10 685 aaPredicted RBP27.56■■■□□ 2
CBWD3-213ENST00000618217 ZNF384Q8TF68 577 aa27.56■■■□□ 2
CBWD3-213ENST00000618217 GPRC5DQ9NZD1 345 aa27.56■■■□□ 2
CBWD3-213ENST00000618217 SHTN1A0MZ66 631 aa27.56■■■□□ 2
CBWD3-213ENST00000618217 USP17L8P0C7I0 530 aa27.56■■■□□ 2
CBWD3-213ENST00000618217 SCN4AP35499 1836 aa27.55■■■□□ 2
CBWD3-213ENST00000618217 POTECB2RU33 542 aa27.55■■■□□ 2
CBWD3-213ENST00000618217 MAP4K4O95819 1239 aaPredicted RBP27.55■■■□□ 2
CBWD3-213ENST00000618217 ZNF280AP59817 542 aaPredicted RBP27.55■■■□□ 2
CBWD3-213ENST00000618217 TTC22Q5TAA0 569 aa27.55■■■□□ 2
CBWD3-213ENST00000618217 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
CBWD3-213ENST00000618217 LRP2BPQ9P2M1 347 aa27.55■■■□□ 2
CBWD3-213ENST00000618217 CNOT7Q9UIV1 285 aaKnown RBP27.55■■■□□ 2
CBWD3-213ENST00000618217 TTF2Q9UNY4 1162 aaKnown RBP27.55■■■□□ 2
CBWD3-213ENST00000618217 F8W031 263 aaPredicted RBP27.54■■■□□ 2
CBWD3-213ENST00000618217 MYH7P12883 1935 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms