RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SNX21Q969T3 373 aa9.65□□□□□ -0.86
MALAT1-208ENST00000616527 STRN4Q9NRL3 753 aa9.65□□□□□ -0.86
MALAT1-208ENST00000616527 POTECB2RU33 542 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 TRIM28Q13263 835 aaKnown RBP9.64□□□□□ -0.87
MALAT1-208ENST00000616527 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
MALAT1-208ENST00000616527 C16orf71Q8IYS4 520 aaPredicted RBP9.64□□□□□ -0.87
MALAT1-208ENST00000616527 RHPN1Q8TCX5 695 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 USP35Q9P2H5 1018 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
MALAT1-208ENST00000616527 COL16A1Q07092 1604 aaPredicted RBP9.64□□□□□ -0.87
MALAT1-208ENST00000616527 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 EXOC5O00471 708 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
MALAT1-208ENST00000616527 SDSP20132 328 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 MX1P20591 662 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 MFAP1P55081 439 aaKnown RBP9.63□□□□□ -0.87
MALAT1-208ENST00000616527 PPP2R2DQ66LE6 453 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 MPNDQ8N594 471 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 BCL9O00512 1426 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
MALAT1-208ENST00000616527 SHANK3Q9BYB0 1731 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 SPATA31A1Q5TZJ5 1347 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 SMARCA5O60264 1052 aaPredicted RBP9.62□□□□□ -0.87
MALAT1-208ENST00000616527 REC8O95072 547 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
MALAT1-208ENST00000616527 TICAM2Q86XR7 235 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 CCDC191Q8NCU4 936 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
MALAT1-208ENST00000616527 OTUD7AQ8TE49 926 aaPredicted RBP9.62□□□□□ -0.87
MALAT1-208ENST00000616527 KAZALD1Q96I82 304 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 COPRSQ9NQ92 184 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 WASF2Q9Y6W5 498 aa9.62□□□□□ -0.87
MALAT1-208ENST00000616527 SLIT2O94813 1529 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 C5P01031 1676 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 H7C1W4 665 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 STARD3NLO95772 234 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 MYL6BP14649 208 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 RFC5P40937 340 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 CASP7P55210 303 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 AIMP1Q12904 312 aaKnown RBP9.61□□□□□ -0.87
MALAT1-208ENST00000616527 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
MALAT1-208ENST00000616527 PIGBQ92521 554 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 SUCLG2Q96I99 432 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
MALAT1-208ENST00000616527 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 ERC2O15083 957 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 GLRX3O76003 335 aaKnown RBP9.6□□□□□ -0.87
MALAT1-208ENST00000616527 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
MALAT1-208ENST00000616527 FAM174AQ8TBP5 190 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 FOXJ1Q92949 421 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 KIF2CQ99661 725 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 MYD88Q99836 296 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
MALAT1-208ENST00000616527 G3BP1Q13283 466 aaKnown RBP eCLIP9.59□□□□□ -0.87
MALAT1-208ENST00000616527 BPHLQ86WA6 291 aaPredicted RBP9.59□□□□□ -0.87
MALAT1-208ENST00000616527 PI4K2BQ8TCG2 481 aa9.59□□□□□ -0.87
MALAT1-208ENST00000616527 GPATCH3Q96I76 525 aa9.59□□□□□ -0.87
MALAT1-208ENST00000616527 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
MALAT1-208ENST00000616527 BICC1Q9H694 974 aaKnown RBP9.59□□□□□ -0.87
MALAT1-208ENST00000616527 CWC25Q9NXE8 425 aaPredicted RBP9.59□□□□□ -0.87
MALAT1-208ENST00000616527 TLL2Q9Y6L7 1015 aa9.59□□□□□ -0.87
MALAT1-208ENST00000616527 A6NJR5 290 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 A1BGP04217 495 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 RFX5P48382 616 aaPredicted RBP9.58□□□□□ -0.88
MALAT1-208ENST00000616527 ANAPC15P60006 121 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 TCIRG1Q13488 830 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 RABEP1Q15276 862 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 HSP90AB3PQ58FF7 597 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 POM121Q96HA1 1249 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 PLA2G12BQ9BX93 195 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 SNRKQ9NRH2 765 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
MALAT1-208ENST00000616527 PHLPP1O60346 1717 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 NWD2Q9ULI1 1742 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 JCADQ9P266 1359 aa9.58□□□□□ -0.88
MALAT1-208ENST00000616527 NRAPQ86VF7 1730 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 A0A087WZG4 1122 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 ERVV-1B6SEH8 477 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 APBB1O00213 710 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
MALAT1-208ENST00000616527 CHMLP26374 656 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 AGERQ15109 404 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 VPS72Q15906 364 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 DDB1Q16531 1140 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 UNC5CLQ8IV45 518 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 HSCBQ8IWL3 235 aa9.57□□□□□ -0.88
MALAT1-208ENST00000616527 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms