RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 MIGA1Q8NAN2 632 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 RAD21O60216 631 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 NR1I2O75469 434 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDE8BO95263 885 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TOP1P11387 765 aaKnown RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 KRT40Q6A162 431 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TMC6Q7Z403 805 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 NSUN7Q8NE18 718 aaKnown RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF274Q96GC6 653 aaPredicted RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 ARGLU1Q9NWB6 273 aaPredicted RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 STX8Q9UNK0 236 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDE6AP16499 860 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 FTOQ9C0B1 505 aaKnown RBP eCLIP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDIA3P30101 505 aaKnown RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TRIM28Q13263 835 aaKnown RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 MROH1Q8NDA8 1641 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 RABL6Q3YEC7 729 aaPredicted RBP6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 CCDC152Q4G0S7 254 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 MYL10Q9BUA6 226 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 NEURL4Q96JN8 1562 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 CBFA2T2O43439 604 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 RTN1Q16799 776 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 ANO1Q5XXA6 986 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 KIAA1524Q8TCG1 905 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 ACSBG1Q96GR2 724 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 TRIM75PA6NK02 468 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 SNAP23O00161 211 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 URI1O94763 535 aaPredicted RBP6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 ADORA1P30542 326 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 PPFIBP1Q86W92 1011 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 CNNM2Q9H8M5 875 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 SLC4A4Q9Y6R1 1079 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 DLC1Q96QB1 1528 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 LPIN2Q92539 896 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 TMEM87BQ96K49 555 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 NLRP3Q96P20 1036 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 DACH1Q9UI36 760 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 IQGAP1P46940 1657 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 SCRN1Q12765 414 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDIA6Q15084 440 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 PHKBQ93100 1093 aa6.5□□□□□ -1.37
SYNCRIP-204ENST00000616122 PHKA1P46020 1223 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 KRT23Q9C075 422 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDE8AO60658 829 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ADALQ6DHV7 355 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 GREM2Q9H772 168 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 IFNKQ9P0W0 207 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ADGRL3Q9HAR2 1447 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 UBA7P41226 1012 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 CATIPQ7Z7H3 387 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 PCDHA7Q9UN72 937 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 A0A087WWV3 80 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 TSPY2A6NKD2 308 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF75DP51815 510 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 UBASH3AP57075 661 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZBTB38Q8NAP3 1195 aaPredicted RBP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 SPATA31A3Q5VYP0 1347 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF532Q9HCE3 1301 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 CCP110O43303 1012 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 TOB2Q14106 344 aaPredicted RBP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 TSGA10IPQ3SY00 556 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 TTLL11Q8NHH1 800 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZKSCAN3Q9BRR0 538 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ATG3Q9NT62 314 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 KIAA1468Q9P260 1216 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 CCDC194A0A1B0GVG4 234 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 BTBD18B2RXH4 712 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF202O95125 648 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 PARP10Q53GL7 1025 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 APOA5Q6Q788 366 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 MAGEB6Q8N7X4 407 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 CPLX3Q8WVH0 158 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 GJB4Q9NTQ9 266 aa6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 V9GYY5 206 aaPredicted RBP6.49□□□□□ -1.37
SYNCRIP-204ENST00000616122 CEP290O15078 2479 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 HEG1Q9ULI3 1381 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 MYL5Q02045 173 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 PUM3Q15397 648 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 SYNE4Q8N205 404 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 UTP14AQ9BVJ6 771 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 NPHP4O75161 1426 aaPredicted RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 BRINP3Q76B58 766 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 NBPF5PQ86XG9 351 aaPredicted RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 PIGBQ92521 554 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms