RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	CHD1L	Q86WJ1	897 aa		12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	WDR66	Q8TBY9	1149 aa		12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	TBC1D22A	Q8WUA7	517 aa		12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	DPF2	Q92785	391 aa		12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	FBXW7	Q969H0	707 aa		12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.86	□□□□□ -0.35
PVT1-223	ENST00000615442	SPATA5	Q8NB90	893 aa		12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	CCDC136	Q96JN2	1154 aa		12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	GML	Q99445	158 aa		12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	BCL11A	Q9H165	835 aa		12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	PPP4R2	Q9NY27	417 aa		12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	DICER1	Q9UPY3	1922 aa	Known RBP	12.85	□□□□□ -0.35
PVT1-223	ENST00000615442	ATP5J	P18859	108 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	GMPS	P49915	693 aa	Predicted RBP	12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	CHAF1A	Q13111	956 aa	Predicted RBP	12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	RASGRF1	Q13972	1273 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	GPATCH3	Q96I76	525 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	ECHDC1	Q9NTX5	307 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	HMG20B	Q9P0W2	317 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	SUGT1	Q9Y2Z0	365 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	SALL1	Q9NSC2	1324 aa		12.84	□□□□□ -0.35
PVT1-223	ENST00000615442	TIAM2	Q8IVF5	1701 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	IQCA1L	A6NCM1	817 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	IGSF3	O75054	1194 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	LMOD1	P29536	600 aa	Predicted RBP	12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	MCAM	P43121	646 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	SCNN1D	P51172	638 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	MFSD14B	Q5SR56	506 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	ZGPAT	Q8N5A5	531 aa	Known RBP	12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	CERS5	Q8N5B7	392 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	MXD3	Q9BW11	206 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	LNPK	Q9C0E8	428 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	GPRC5D	Q9NZD1	345 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	CNOT7	Q9UIV1	285 aa	Known RBP	12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	JAG2	Q9Y219	1238 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	TTC41P	Q6P2S7	1318 aa		12.83	□□□□□ -0.36
PVT1-223	ENST00000615442	GOLGB1	Q14789	3259 aa	Known RBP	12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	ARAP2	Q8WZ64	1704 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	POTEC	B2RU33	542 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442		H7C1D1	291 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	USP17L8	P0C7I0	530 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	VEGFA	P15692	232 aa	Predicted RBP	12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	SCARF1	Q14162	830 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	OGFOD1	Q8N543	542 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	MRI	Q9BWK5	157 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	RRAGC	Q9HB90	399 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	STAP2	Q9UGK3	403 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	HACL1	Q9UJ83	578 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	CCDC88A	Q3V6T2	1871 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	CHD4	Q14839	1912 aa		12.82	□□□□□ -0.36
PVT1-223	ENST00000615442	ERC2	O15083	957 aa		12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	MX1	P20591	662 aa		12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	ZNF280A	P59817	542 aa	Predicted RBP	12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	ZNF526	Q8TF50	670 aa	Predicted RBP	12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	HDAC9	Q9UKV0	1011 aa		12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	SALL3	Q9BXA9	1300 aa		12.81	□□□□□ -0.36
PVT1-223	ENST00000615442	COL1A1	P02452	1464 aa	Predicted RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	LDHB	P07195	334 aa	Known RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	EPS15	P42566	896 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	ZAP70	P43403	619 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	HDLBP	Q00341	1268 aa	Known RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	TTF1	Q15361	905 aa	Predicted RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	PI16	Q6UXB8	463 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	PNMA8A	Q86V59	439 aa	Predicted RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	KIAA0825	Q8IV33	1275 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	MICALL2	Q8IY33	904 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	HAUS7	Q99871	368 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	SNRK	Q9NRH2	765 aa		12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	ADARB2	Q9NS39	739 aa	Known RBP	12.8	□□□□□ -0.36
PVT1-223	ENST00000615442	GLRX3	O76003	335 aa	Known RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	CYP2E1	P05181	493 aa	Predicted RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	EPHX2	P34913	555 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	PDE1A	P54750	535 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	USP50	Q70EL3	339 aa	Predicted RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	ERICH6	Q7L0X2	663 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	BOLA2	Q9H3K6	86 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	OSBPL3	Q9H4L5	887 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	NMRK2	Q9NPI5	230 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	ABCF2	Q9UG63	623 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	SERPINA10	Q9UK55	444 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	TTF2	Q9UNY4	1162 aa	Known RBP	12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	MAST3	O60307	1309 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442	WDR90	Q96KV7	1748 aa		12.79	□□□□□ -0.36
PVT1-223	ENST00000615442		F8W031	263 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	GRIK5	Q16478	980 aa		12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	TMED8	Q6PL24	325 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	TBC1D9	Q6ZT07	1266 aa		12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	PLEKHM2	Q8IWE5	1019 aa		12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	MTMR14	Q8NCE2	650 aa		12.78	□□□□□ -0.36
PVT1-223	ENST00000615442	PI4K2B	Q8TCG2	481 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms