RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 C22orf23Q9BZE7 217 aa24.47■■□□□ 1.51
CPNE9-205ENST00000613455 ZNF219Q9P2Y4 722 aaPredicted RBP24.47■■□□□ 1.51
CPNE9-205ENST00000613455 RNF113AO15541 343 aaKnown RBP24.46■■□□□ 1.51
CPNE9-205ENST00000613455 CD2APQ9Y5K6 639 aa24.46■■□□□ 1.51
CPNE9-205ENST00000613455 TDRD7Q8NHU6 1098 aaKnown RBP24.45■■□□□ 1.5
CPNE9-205ENST00000613455 GOLGB1Q14789 3259 aaKnown RBP24.45■■□□□ 1.5
CPNE9-205ENST00000613455 ZMYM1Q5SVZ6 1142 aa24.44■■□□□ 1.5
CPNE9-205ENST00000613455 ANO2Q9NQ90 1003 aa24.44■■□□□ 1.5
CPNE9-205ENST00000613455 IDH1O75874 414 aaKnown RBP24.44■■□□□ 1.5
CPNE9-205ENST00000613455 ZFYP08048 801 aaPredicted RBP24.44■■□□□ 1.5
CPNE9-205ENST00000613455 CC2D2BQ6DHV5 1058 aa24.44■■□□□ 1.5
CPNE9-205ENST00000613455 ZNF589Q86UQ0 364 aaPredicted RBP24.44■■□□□ 1.5
CPNE9-205ENST00000613455 SEC62Q99442 399 aaKnown RBP24.44■■□□□ 1.5
CPNE9-205ENST00000613455 PPP1R1BQ9UD71 204 aaPredicted RBP24.44■■□□□ 1.5
CPNE9-205ENST00000613455 C21orf2O43822 256 aa24.43■■□□□ 1.5
CPNE9-205ENST00000613455 FRAT2O75474 233 aaPredicted RBP24.43■■□□□ 1.5
CPNE9-205ENST00000613455 IL1R1P14778 569 aa24.43■■□□□ 1.5
CPNE9-205ENST00000613455 RBM25P49756 843 aaKnown RBP24.43■■□□□ 1.5
CPNE9-205ENST00000613455 LRRFIP1Q32MZ4 808 aaKnown RBP24.43■■□□□ 1.5
CPNE9-205ENST00000613455 RTFDC1Q9BY42 306 aaPredicted RBP24.43■■□□□ 1.5
CPNE9-205ENST00000613455 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.43■■□□□ 1.5
CPNE9-205ENST00000613455 CD209Q9NNX6 404 aa24.43■■□□□ 1.5
CPNE9-205ENST00000613455 WWC3Q9ULE0 1092 aa24.43■■□□□ 1.5
CPNE9-205ENST00000613455 CHD4Q14839 1912 aa24.42■■□□□ 1.5
CPNE9-205ENST00000613455 ADD2P35612 726 aa24.42■■□□□ 1.5
CPNE9-205ENST00000613455 LSG1Q9H089 658 aaKnown RBP24.42■■□□□ 1.5
CPNE9-205ENST00000613455 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
CPNE9-205ENST00000613455 PIM2Q9P1W9 311 aa24.42■■□□□ 1.5
CPNE9-205ENST00000613455 WASHC4Q2M389 1173 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 RIMBP2O15034 1052 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 MCMDC2Q4G0Z9 681 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 SLC9C2Q5TAH2 1124 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 OSBP2Q969R2 916 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 HELLSQ9NRZ9 838 aa24.41■■□□□ 1.5
CPNE9-205ENST00000613455 MAST3O60307 1309 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 PDE6AP16499 860 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 MAP3K12Q12852 859 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 CHAF1AQ13111 956 aaPredicted RBP24.4■■□□□ 1.5
CPNE9-205ENST00000613455 ZSCAN25Q6NSZ9 544 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 CCDC129Q6ZRS4 1044 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 EYA3Q99504 573 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 MAST2Q6P0Q8 1798 aa24.4■■□□□ 1.5
CPNE9-205ENST00000613455 EPB41L2O43491 1005 aaKnown RBP24.39■■□□□ 1.5
CPNE9-205ENST00000613455 CCDC93Q567U6 631 aa24.39■■□□□ 1.5
CPNE9-205ENST00000613455 APPBP2Q92624 585 aa24.39■■□□□ 1.5
CPNE9-205ENST00000613455 ZC3H12CQ9C0D7 883 aaKnown RBP24.39■■□□□ 1.5
CPNE9-205ENST00000613455 JAG2Q9Y219 1238 aa24.39■■□□□ 1.5
CPNE9-205ENST00000613455 M0R2C6 588 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 PTH1RQ03431 593 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 UBE3CQ15386 1083 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 COA1Q9GZY4 146 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 LRP2BPQ9P2M1 347 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 ABCF2Q9UG63 623 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 CCDC171Q6TFL3 1326 aa24.38■■□□□ 1.49
CPNE9-205ENST00000613455 ZNF532Q9HCE3 1301 aa24.37■■□□□ 1.49
CPNE9-205ENST00000613455 SALL1Q9NSC2 1324 aa24.37■■□□□ 1.49
CPNE9-205ENST00000613455 GRIPAP1Q4V328 841 aa24.37■■□□□ 1.49
CPNE9-205ENST00000613455 DALRD3Q5D0E6 543 aaKnown RBP24.37■■□□□ 1.49
CPNE9-205ENST00000613455 KIAA1211Q6ZU35 1233 aa24.37■■□□□ 1.49
CPNE9-205ENST00000613455 MAGEB6Q8N7X4 407 aa24.37■■□□□ 1.49
CPNE9-205ENST00000613455 PUS7LQ9H0K6 701 aaKnown RBP24.37■■□□□ 1.49
CPNE9-205ENST00000613455 CCDC88AQ3V6T2 1871 aa24.36■■□□□ 1.49
CPNE9-205ENST00000613455 RTKN2Q8IZC4 609 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 NLGN2Q8NFZ4 835 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 WDR66Q8TBY9 1149 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 KIF2CQ99661 725 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 ZNF384Q8TF68 577 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 FER1L6Q2WGJ9 1857 aa24.35■■□□□ 1.49
CPNE9-205ENST00000613455 PRDX5P30044 214 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 DOK7Q18PE1 504 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 SOGA3Q5TF21 947 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 SUPT20HQ8NEM7 779 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 PSMD1Q99460 953 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 RAI14Q9P0K7 980 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 FAM205AQ6ZU69 1335 aa24.34■■□□□ 1.49
CPNE9-205ENST00000613455 ZNF646O15015 1829 aaPredicted RBP24.34■■□□□ 1.49
CPNE9-205ENST00000613455 KIAA2012Q0VF49 1180 aa24.33■■□□□ 1.49
CPNE9-205ENST00000613455 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
CPNE9-205ENST00000613455 MAP4K1Q92918 833 aa24.33■■□□□ 1.49
CPNE9-205ENST00000613455 SCN9AQ15858 1988 aa24.33■■□□□ 1.49
CPNE9-205ENST00000613455 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.48
CPNE9-205ENST00000613455 HSPA4P34932 840 aa24.32■■□□□ 1.48
CPNE9-205ENST00000613455 ANP32AP39687 249 aaKnown RBP24.32■■□□□ 1.48
CPNE9-205ENST00000613455 AOC3Q16853 763 aa24.32■■□□□ 1.48
CPNE9-205ENST00000613455 ZGPATQ8N5A5 531 aaKnown RBP24.32■■□□□ 1.48
CPNE9-205ENST00000613455 ADGRA1Q86SQ6 560 aa24.32■■□□□ 1.48
CPNE9-205ENST00000613455 NSUN4Q96CB9 384 aaKnown RBP24.32■■□□□ 1.48
CPNE9-205ENST00000613455 DBNDD1Q9H9R9 158 aa24.32■■□□□ 1.48
CPNE9-205ENST00000613455 PALD1Q9ULE6 856 aa24.32■■□□□ 1.48
CPNE9-205ENST00000613455 GPAA1O43292 621 aa24.31■■□□□ 1.48
CPNE9-205ENST00000613455 MECOMQ03112 1051 aa24.31■■□□□ 1.48
CPNE9-205ENST00000613455 GRIK5Q16478 980 aa24.31■■□□□ 1.48
CPNE9-205ENST00000613455 VPS53Q5VIR6 699 aa24.31■■□□□ 1.48
CPNE9-205ENST00000613455 SPTY2D1Q68D10 685 aaPredicted RBP24.3■■□□□ 1.48
CPNE9-205ENST00000613455 RBM8AQ9Y5S9 174 aaKnown RBP24.3■■□□□ 1.48
CPNE9-205ENST00000613455 FOXP2O15409 715 aa24.3■■□□□ 1.48
CPNE9-205ENST00000613455 CYP7A1P22680 504 aa24.3■■□□□ 1.48
CPNE9-205ENST00000613455 MCCP23508 829 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms