RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PHKA1P46020 1223 aa20.47■□□□□ 0.87
IRF1-211ENST00000613424 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
IRF1-211ENST00000613424 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
IRF1-211ENST00000613424 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
IRF1-211ENST00000613424 TOMM70O94826 608 aa20.46■□□□□ 0.87
IRF1-211ENST00000613424 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
IRF1-211ENST00000613424 EAF2Q96CJ1 260 aaPredicted RBP20.46■□□□□ 0.87
IRF1-211ENST00000613424 ADARB2Q9NS39 739 aaKnown RBP20.46■□□□□ 0.87
IRF1-211ENST00000613424 GNL3LQ9NVN8 582 aaKnown RBP20.46■□□□□ 0.87
IRF1-211ENST00000613424 MYO3BQ8WXR4 1341 aa20.46■□□□□ 0.87
IRF1-211ENST00000613424 USP17L8P0C7I0 530 aa20.45■□□□□ 0.86
IRF1-211ENST00000613424 POTEIP0CG38 1075 aa20.45■□□□□ 0.86
IRF1-211ENST00000613424 POTEJP0CG39 1038 aa20.45■□□□□ 0.86
IRF1-211ENST00000613424 FKBP1AP62942 108 aaKnown RBP20.45■□□□□ 0.86
IRF1-211ENST00000613424 CHAF1AQ13111 956 aaPredicted RBP20.45■□□□□ 0.86
IRF1-211ENST00000613424 EAPPQ56P03 285 aaPredicted RBP20.45■□□□□ 0.86
IRF1-211ENST00000613424 GORABQ5T7V8 394 aa20.45■□□□□ 0.86
IRF1-211ENST00000613424 PNMA8AQ86V59 439 aaPredicted RBP20.45■□□□□ 0.86
IRF1-211ENST00000613424 CCDC8Q9H0W5 538 aaPredicted RBP20.45■□□□□ 0.86
IRF1-211ENST00000613424 IL1RAPL2Q9NP60 686 aa20.45■□□□□ 0.86
IRF1-211ENST00000613424 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
IRF1-211ENST00000613424 ZNF280AP59817 542 aaPredicted RBP20.44■□□□□ 0.86
IRF1-211ENST00000613424 USP50Q70EL3 339 aaPredicted RBP20.44■□□□□ 0.86
IRF1-211ENST00000613424 SAMD7Q7Z3H4 446 aa20.44■□□□□ 0.86
IRF1-211ENST00000613424 DBNDD2Q9BQY9 259 aa20.44■□□□□ 0.86
IRF1-211ENST00000613424 ZBTB22O15209 634 aa20.43■□□□□ 0.86
IRF1-211ENST00000613424 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
IRF1-211ENST00000613424 RBM26Q5T8P6 1007 aaKnown RBP20.43■□□□□ 0.86
IRF1-211ENST00000613424 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
IRF1-211ENST00000613424 TRPM4Q8TD43 1214 aa20.43■□□□□ 0.86
IRF1-211ENST00000613424 SEMA3EO15041 775 aa20.42■□□□□ 0.86
IRF1-211ENST00000613424 HIRAP54198 1017 aaPredicted RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 TBC1D10BQ4KMP7 808 aaPredicted RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 AACSQ86V21 672 aa20.42■□□□□ 0.86
IRF1-211ENST00000613424 CLASRPQ8N2M8 674 aaKnown RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
IRF1-211ENST00000613424 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 DBNLQ9UJU6 430 aaKnown RBP20.42■□□□□ 0.86
IRF1-211ENST00000613424 DENND2AQ9ULE3 1009 aa20.42■□□□□ 0.86
IRF1-211ENST00000613424 CLEC11AQ9Y240 323 aa20.42■□□□□ 0.86
IRF1-211ENST00000613424 F8W031 263 aaPredicted RBP20.41■□□□□ 0.86
IRF1-211ENST00000613424 EGFRP00533 1210 aa20.41■□□□□ 0.86
IRF1-211ENST00000613424 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
IRF1-211ENST00000613424 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
IRF1-211ENST00000613424 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
IRF1-211ENST00000613424 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
IRF1-211ENST00000613424 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
IRF1-211ENST00000613424 COL1A1P02452 1464 aaPredicted RBP20.4■□□□□ 0.86
IRF1-211ENST00000613424 ARID4AP29374 1257 aaPredicted RBP20.4■□□□□ 0.86
IRF1-211ENST00000613424 MMP14P50281 582 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 CCDC158Q5M9N0 1113 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 WDR66Q8TBY9 1149 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 MYOZ2Q9NPC6 264 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 HDAC9Q9UKV0 1011 aa20.4■□□□□ 0.86
IRF1-211ENST00000613424 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.85
IRF1-211ENST00000613424 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 GRIK5Q16478 980 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 KIF4BQ2VIQ3 1234 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 CHADLQ6NUI6 762 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 SMC1BQ8NDV3 1235 aa20.39■□□□□ 0.85
IRF1-211ENST00000613424 MYH13Q9UKX3 1938 aa20.38■□□□□ 0.85
IRF1-211ENST00000613424 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
IRF1-211ENST00000613424 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
IRF1-211ENST00000613424 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
IRF1-211ENST00000613424 HMG20BQ9P0W2 317 aa20.38■□□□□ 0.85
IRF1-211ENST00000613424 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
IRF1-211ENST00000613424 ADAMTSL1Q8N6G6 1762 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 MCAMP43121 646 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 C1QTNF8P60827 252 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 FSTL1Q12841 308 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 SCARF1Q14162 830 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 SPATA5Q8NB90 893 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 ZC3H15Q8WU90 426 aaKnown RBP20.37■□□□□ 0.85
IRF1-211ENST00000613424 ZNF512BQ96KM6 892 aaPredicted RBP20.37■□□□□ 0.85
IRF1-211ENST00000613424 PGAP2Q9UHJ9 254 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 SUGT1Q9Y2Z0 365 aa20.37■□□□□ 0.85
IRF1-211ENST00000613424 PDS5AQ29RF7 1337 aaKnown RBP20.36■□□□□ 0.85
IRF1-211ENST00000613424 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
IRF1-211ENST00000613424 IGHDP01880 384 aa20.36■□□□□ 0.85
IRF1-211ENST00000613424 PI16Q6UXB8 463 aa20.36■□□□□ 0.85
IRF1-211ENST00000613424 NBPF9Q3BBW0 867 aa20.35■□□□□ 0.85
IRF1-211ENST00000613424 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
IRF1-211ENST00000613424 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
IRF1-211ENST00000613424 SNRKQ9NRH2 765 aa20.35■□□□□ 0.85
IRF1-211ENST00000613424 WNT10BO00744 389 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 DLGAP5Q15398 846 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 CFAP100Q494V2 611 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 MTMR14Q8NCE2 650 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 ZBED3Q96IU2 234 aaPredicted RBP20.34■□□□□ 0.85
IRF1-211ENST00000613424 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
IRF1-211ENST00000613424 ASTN2O75129 1339 aaPredicted RBP20.33■□□□□ 0.85
IRF1-211ENST00000613424 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.85
IRF1-211ENST00000613424 PRDX5P30044 214 aa20.33■□□□□ 0.85
IRF1-211ENST00000613424 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
IRF1-211ENST00000613424 ZGPATQ8N5A5 531 aaKnown RBP20.33■□□□□ 0.85
IRF1-211ENST00000613424 MRIQ9BWK5 157 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms