RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 SASH1O94885 1247 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 TFCP2Q12800 502 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 DACT2Q5SW24 774 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 STRIP1Q5VSL9 837 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 RSBN1LQ6PCB5 846 aaPredicted RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 FBXO33Q7Z6M2 555 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 DPF2Q92785 391 aa14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
CCL3L3-201ENST00000612839 SHTN1A0MZ66 631 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 POTEJP0CG39 1038 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 SLC5A1P13866 664 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 RPS12P25398 132 aaKnown RBP14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 GTF2IP78347 998 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 ATP2B3Q16720 1220 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 TTLL5Q6EMB2 1281 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 TDRD7Q8NHU6 1098 aaKnown RBP14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 GMLQ99445 158 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 MXD3Q9BW11 206 aa14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.16
CCL3L3-201ENST00000612839 BCAMP50895 628 aa14.01□□□□□ -0.17
CCL3L3-201ENST00000612839 MICALL2Q8IY33 904 aa14.01□□□□□ -0.17
CCL3L3-201ENST00000612839 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
CCL3L3-201ENST00000612839 CRBNQ96SW2 442 aa14.01□□□□□ -0.17
CCL3L3-201ENST00000612839 MYH13Q9UKX3 1938 aa14□□□□□ -0.17
CCL3L3-201ENST00000612839 A0A1B0GUL7 405 aa14□□□□□ -0.17
CCL3L3-201ENST00000612839 TIMM10P62072 90 aa14□□□□□ -0.17
CCL3L3-201ENST00000612839 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
CCL3L3-201ENST00000612839 VPS37DQ86XT2 251 aa14□□□□□ -0.17
CCL3L3-201ENST00000612839 RBM46Q8TBY0 533 aaKnown RBP14□□□□□ -0.17
CCL3L3-201ENST00000612839 FBXW7Q969H0 707 aa14□□□□□ -0.17
CCL3L3-201ENST00000612839 ADARB2Q9NS39 739 aaKnown RBP14□□□□□ -0.17
CCL3L3-201ENST00000612839 ADORA1P30542 326 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 C1QTNF8P60827 252 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 EAPPQ56P03 285 aaPredicted RBP13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 EXOC6BQ9Y2D4 811 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 AKAP2Q9Y2D5 859 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 FAM205AQ6ZU69 1335 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 MYO3BQ8WXR4 1341 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 H7C1D1 291 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 HMMRO75330 724 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 EGFRP00533 1210 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 CERS5Q8N5B7 392 aa13.99□□□□□ -0.17
CCL3L3-201ENST00000612839 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 HIRAP54198 1017 aaPredicted RBP13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 SAMD7Q7Z3H4 446 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 TRPM4Q8TD43 1214 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 XAGE2Q96GT9 111 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 GPR108Q9NPR9 543 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 PCDHB15Q9Y5E8 787 aa13.98□□□□□ -0.17
CCL3L3-201ENST00000612839 COL1A1P02452 1464 aaPredicted RBP13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 PHKA1P46020 1223 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 FKBP1AP62942 108 aaKnown RBP13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
CCL3L3-201ENST00000612839 FRAT2O75474 233 aaPredicted RBP13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 FSTL1Q12841 308 aa13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 TBC1D10BQ4KMP7 808 aaPredicted RBP13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 MFSD14BQ5SR56 506 aa13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
CCL3L3-201ENST00000612839 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 KIF4BQ2VIQ3 1234 aa13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
CCL3L3-201ENST00000612839 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
CCL3L3-201ENST00000612839 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
CCL3L3-201ENST00000612839 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
CCL3L3-201ENST00000612839 GNL3LQ9NVN8 582 aaKnown RBP13.94□□□□□ -0.18
CCL3L3-201ENST00000612839 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
CCL3L3-201ENST00000612839 F8W031 263 aaPredicted RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 APBB1O00213 710 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 SEMA3EO15041 775 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 GRIK5Q16478 980 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 ZC3H15Q8WU90 426 aaKnown RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 KIF1BPQ96EK5 621 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms