RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CHMP4AQ9BY43 222 aa30.01■■■□□ 2.39
MMP28-203ENST00000612672 RBBP6Q7Z6E9 1792 aaKnown RBP30■■■□□ 2.39
MMP28-203ENST00000612672 MAP3K11Q16584 847 aa30■■■□□ 2.39
MMP28-203ENST00000612672 IFNL1Q8IU54 200 aa30■■■□□ 2.39
MMP28-203ENST00000612672 WNK4Q96J92 1243 aa30■■■□□ 2.39
MMP28-203ENST00000612672 JAG2Q9Y219 1238 aa30■■■□□ 2.39
MMP28-203ENST00000612672 CLRN2A0PK11 232 aa29.99■■■□□ 2.39
MMP28-203ENST00000612672 F8W031 263 aaPredicted RBP29.99■■■□□ 2.39
MMP28-203ENST00000612672 GJA5P36382 358 aa29.99■■■□□ 2.39
MMP28-203ENST00000612672 KCNJ4P48050 445 aa29.99■■■□□ 2.39
MMP28-203ENST00000612672 DLGAP5Q15398 846 aa29.99■■■□□ 2.39
MMP28-203ENST00000612672 MTMR14Q8NCE2 650 aa29.99■■■□□ 2.39
MMP28-203ENST00000612672 CAP1Q01518 475 aa29.98■■■□□ 2.39
MMP28-203ENST00000612672 WWC1Q8IX03 1113 aa29.98■■■□□ 2.39
MMP28-203ENST00000612672 DNAAF4Q8WXU2 420 aa29.98■■■□□ 2.39
MMP28-203ENST00000612672 FOXO4P98177 505 aa29.97■■■□□ 2.39
MMP28-203ENST00000612672 ARAP2Q8WZ64 1704 aa29.96■■■□□ 2.39
MMP28-203ENST00000612672 CFAP100Q494V2 611 aa29.96■■■□□ 2.39
MMP28-203ENST00000612672 NBPF12Q5TAG4 269 aaPredicted RBP29.96■■■□□ 2.39
MMP28-203ENST00000612672 C15orf52Q6ZUT6 534 aaKnown RBP29.96■■■□□ 2.39
MMP28-203ENST00000612672 OTOP1Q7RTM1 612 aa29.96■■■□□ 2.39
MMP28-203ENST00000612672 SLC10A4Q96EP9 437 aa29.96■■■□□ 2.39
MMP28-203ENST00000612672 PRMT6Q96LA8 375 aaPredicted RBP29.96■■■□□ 2.39
MMP28-203ENST00000612672 KIAA0100Q14667 2235 aaKnown RBP29.96■■■□□ 2.39
MMP28-203ENST00000612672 POTEFA5A3E0 1075 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 SPDYE2BA6NHP3 402 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 MANSC4A6NHS7 340 aaPredicted RBP29.95■■■□□ 2.39
MMP28-203ENST00000612672 SPDYE6P0CI01 402 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 FKBP5Q13451 457 aaPredicted RBP29.95■■■□□ 2.39
MMP28-203ENST00000612672 CCDC27Q2M243 656 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 LINS1Q8NG48 757 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 TRIM17Q9Y577 477 aa29.95■■■□□ 2.39
MMP28-203ENST00000612672 ANKRD18BA2A2Z9 1011 aa29.94■■■□□ 2.38
MMP28-203ENST00000612672 IL1R1P14778 569 aa29.94■■■□□ 2.38
MMP28-203ENST00000612672 EPHA10Q5JZY3 1008 aa29.94■■■□□ 2.38
MMP28-203ENST00000612672 MYH16Q9H6N6 1097 aa29.94■■■□□ 2.38
MMP28-203ENST00000612672 ALDH1A1P00352 501 aa29.93■■■□□ 2.38
MMP28-203ENST00000612672 ZBTB48P10074 688 aaPredicted RBP29.93■■■□□ 2.38
MMP28-203ENST00000612672 FANCIQ9NVI1 1328 aa29.93■■■□□ 2.38
MMP28-203ENST00000612672 ZNF594Q96JF6 807 aaPredicted RBP29.92■■■□□ 2.38
MMP28-203ENST00000612672 VEZTQ9HBM0 779 aa29.92■■■□□ 2.38
MMP28-203ENST00000612672 PPP2R3BQ9Y5P8 575 aa29.92■■■□□ 2.38
MMP28-203ENST00000612672 F6X3S4 739 aa29.91■■■□□ 2.38
MMP28-203ENST00000612672 USP2O75604 605 aaPredicted RBP29.91■■■□□ 2.38
MMP28-203ENST00000612672 CDAN1Q8IWY9 1227 aa29.91■■■□□ 2.38
MMP28-203ENST00000612672 PTPN18Q99952 460 aa29.91■■■□□ 2.38
MMP28-203ENST00000612672 CRHR2Q13324 411 aa29.9■■■□□ 2.38
MMP28-203ENST00000612672 CD99L2Q8TCZ2 262 aa29.9■■■□□ 2.38
MMP28-203ENST00000612672 PPP1R12BO60237 982 aaPredicted RBP29.89■■■□□ 2.38
MMP28-203ENST00000612672 ZSWIM8A7E2V4 1837 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 INHBEP58166 350 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 IFIT5Q13325 482 aaKnown RBP29.88■■■□□ 2.37
MMP28-203ENST00000612672 RASA3Q14644 834 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 ZNF804AQ7Z570 1209 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 CHMP3Q9Y3E7 222 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 IL16Q14005 1332 aa29.88■■■□□ 2.37
MMP28-203ENST00000612672 VAMP4O75379 141 aa29.87■■■□□ 2.37
MMP28-203ENST00000612672 FKBP1AP62942 108 aaKnown RBP29.87■■■□□ 2.37
MMP28-203ENST00000612672 BEND3Q5T5X7 828 aa29.87■■■□□ 2.37
MMP28-203ENST00000612672 LMBR1LQ6UX01 489 aa29.86■■■□□ 2.37
MMP28-203ENST00000612672 PTPN22Q9Y2R2 807 aa29.86■■■□□ 2.37
MMP28-203ENST00000612672 SUPT20HL1Q3ZLR7 823 aa29.85■■■□□ 2.37
MMP28-203ENST00000612672 CNKSR2Q8WXI2 1034 aa29.85■■■□□ 2.37
MMP28-203ENST00000612672 PLIN1O60240 522 aa29.84■■■□□ 2.37
MMP28-203ENST00000612672 ELP3Q9H9T3 547 aa29.84■■■□□ 2.37
MMP28-203ENST00000612672 FAM205AQ6ZU69 1335 aa29.83■■■□□ 2.37
MMP28-203ENST00000612672 TESPA1A2RU30 521 aaPredicted RBP29.83■■■□□ 2.37
MMP28-203ENST00000612672 MYO1BO43795 1136 aa29.83■■■□□ 2.37
MMP28-203ENST00000612672 IREB2P48200 963 aaKnown RBP29.83■■■□□ 2.37
MMP28-203ENST00000612672 RBM5P52756 815 aaKnown RBP eCLIP29.83■■■□□ 2.37
MMP28-203ENST00000612672 SPDYE2Q495Y8 402 aa29.83■■■□□ 2.37
MMP28-203ENST00000612672 TEPSINQ96N21 525 aa29.83■■■□□ 2.37
MMP28-203ENST00000612672 UNCXA6NJT0 531 aa29.82■■■□□ 2.36
MMP28-203ENST00000612672 EXOSC9Q06265 439 aaKnown RBP29.82■■■□□ 2.36
MMP28-203ENST00000612672 ANKRD13AQ8IZ07 590 aa29.82■■■□□ 2.36
MMP28-203ENST00000612672 MS4A4AQ96JQ5 239 aa29.82■■■□□ 2.36
MMP28-203ENST00000612672 ZNF70Q9UC06 446 aaPredicted RBP29.82■■■□□ 2.36
MMP28-203ENST00000612672 GRIK5Q16478 980 aa29.81■■■□□ 2.36
MMP28-203ENST00000612672 OPTNQ96CV9 577 aa29.81■■■□□ 2.36
MMP28-203ENST00000612672 ERO1AQ96HE7 468 aa29.81■■■□□ 2.36
MMP28-203ENST00000612672 TDRD3Q9H7E2 651 aaKnown RBP29.81■■■□□ 2.36
MMP28-203ENST00000612672 GYG1P46976 350 aa29.8■■■□□ 2.36
MMP28-203ENST00000612672 LDHAL6AQ6ZMR3 332 aa29.8■■■□□ 2.36
MMP28-203ENST00000612672 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.8■■■□□ 2.36
MMP28-203ENST00000612672 TDRD7Q8NHU6 1098 aaKnown RBP29.8■■■□□ 2.36
MMP28-203ENST00000612672 ARMC5Q96C12 935 aa29.8■■■□□ 2.36
MMP28-203ENST00000612672 SPINK5Q9NQ38 1064 aaPredicted RBP29.8■■■□□ 2.36
MMP28-203ENST00000612672 EN2P19622 333 aaPredicted RBP29.79■■■□□ 2.36
MMP28-203ENST00000612672 MFSD14BQ5SR56 506 aa29.79■■■□□ 2.36
MMP28-203ENST00000612672 PUS3Q9BZE2 481 aaKnown RBP29.79■■■□□ 2.36
MMP28-203ENST00000612672 EFCC1Q9HA90 598 aa29.79■■■□□ 2.36
MMP28-203ENST00000612672 INTS3Q68E01 1043 aaKnown RBP29.78■■■□□ 2.36
MMP28-203ENST00000612672 BRI3BPQ8WY22 251 aa29.78■■■□□ 2.36
MMP28-203ENST00000612672 CNNM1Q9NRU3 951 aa29.78■■■□□ 2.36
MMP28-203ENST00000612672 TTF2Q9UNY4 1162 aaKnown RBP29.78■■■□□ 2.36
MMP28-203ENST00000612672 SALL2Q9Y467 1007 aaPredicted RBP29.78■■■□□ 2.36
MMP28-203ENST00000612672 GRM8O00222 908 aa29.77■■■□□ 2.36
MMP28-203ENST00000612672 SP3Q02447 781 aa29.77■■■□□ 2.36
MMP28-203ENST00000612672 HABP4Q5JVS0 413 aaKnown RBP29.77■■■□□ 2.36
MMP28-203ENST00000612672 FAM84BQ96KN1 310 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms