RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 KDRP35968 1356 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 ODF2Q5BJF6 829 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 IFIT1BQ5T764 474 aaKnown RBP14.22□□□□□ -0.13
CDH1-212ENST00000611625 DHX58Q96C10 678 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
CDH1-212ENST00000611625 FEZ1Q99689 392 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 CDC42BPBQ9Y5S2 1711 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 NEURL1BA8MQ27 555 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
CDH1-212ENST00000611625 ZFYVE27Q5T4F4 411 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 ANO1Q5XXA6 986 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 OTUD7BQ6GQQ9 843 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 TSG101Q99816 390 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 KAT14Q9H8E8 782 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 PODXL2Q9NZ53 605 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 ORAI2Q96SN7 254 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 CHD1O14646 1710 aa14.22□□□□□ -0.13
CDH1-212ENST00000611625 CPSF1Q10570 1443 aaKnown RBP14.22□□□□□ -0.13
CDH1-212ENST00000611625 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 HELBQ8NG08 1087 aaPredicted RBP14.21□□□□□ -0.13
CDH1-212ENST00000611625 RMND1Q9NWS8 449 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.13
CDH1-212ENST00000611625 APPBP2Q92624 585 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 TRIM47Q96LD4 638 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDH1-212ENST00000611625 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 RNF17Q9BXT8 1623 aaKnown RBP14.21□□□□□ -0.13
CDH1-212ENST00000611625 CCDC175P0C221 793 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 IL2RBP14784 551 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 PAFAH1B1P43034 410 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.13
CDH1-212ENST00000611625 IRS4O14654 1257 aaPredicted RBP14.21□□□□□ -0.14
CDH1-212ENST00000611625 ZPR1O75312 459 aa14.21□□□□□ -0.14
CDH1-212ENST00000611625 CCDC191Q8NCU4 936 aa14.21□□□□□ -0.14
CDH1-212ENST00000611625 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.14
CDH1-212ENST00000611625 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 ERO1AQ96HE7 468 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 GTPBP4Q9BZE4 634 aaKnown RBP14.2□□□□□ -0.14
CDH1-212ENST00000611625 TDRD12Q587J7 1177 aaKnown RBP14.2□□□□□ -0.14
CDH1-212ENST00000611625 CRNKL1Q9BZJ0 848 aaKnown RBP14.2□□□□□ -0.14
CDH1-212ENST00000611625 GNAT2P19087 354 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 FAM89AQ96GI7 184 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 ABCA6Q8N139 1617 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 USP6P35125 1406 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 IDEP14735 1019 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 AMPD3Q01432 767 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 MAGEB6Q8N7X4 407 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 OGFRQ9NZT2 677 aa14.2□□□□□ -0.14
CDH1-212ENST00000611625 CALML4Q96GE6 196 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
CDH1-212ENST00000611625 ANGEL1Q9UNK9 670 aaKnown RBP14.19□□□□□ -0.14
CDH1-212ENST00000611625 B4E1Z4 1266 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 FAM114A1Q8IWE2 563 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
CDH1-212ENST00000611625 XAGE2Q96GT9 111 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 GPAA1O43292 621 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 RDXP35241 583 aaKnown RBP14.19□□□□□ -0.14
CDH1-212ENST00000611625 LMAN1P49257 510 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 SMAP1Q8IYB5 467 aaPredicted RBP14.19□□□□□ -0.14
CDH1-212ENST00000611625 DSCC1Q9BVC3 393 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 STX17P56962 302 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 GLI2P10070 1586 aa14.19□□□□□ -0.14
CDH1-212ENST00000611625 STAT6P42226 847 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 MAP4K1Q92918 833 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 E9PCH4 1651 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 CTAGE15A4D2H0 777 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 NR1I2O75469 434 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 CTAGE8P0CG41 777 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
CDH1-212ENST00000611625 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 CTAGE4Q8IX94 777 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 EHBP1Q8NDI1 1231 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 SMARCC1Q92922 1105 aaPredicted RBP14.18□□□□□ -0.14
CDH1-212ENST00000611625 TMEM87BQ96K49 555 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 SEPT11Q9NVA2 429 aaKnown RBP14.18□□□□□ -0.14
CDH1-212ENST00000611625 E7EWF7 191 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 IGSF3O75054 1194 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 DNA2P51530 1060 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 KARSQ15046 597 aaKnown RBP14.18□□□□□ -0.14
CDH1-212ENST00000611625 SLC4A8Q2Y0W8 1093 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 MIGA1Q8NAN2 632 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 RTL9Q8NET4 1388 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 ZNF202O95125 648 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 MBD4O95243 580 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 RBM5P52756 815 aaKnown RBP eCLIP14.18□□□□□ -0.14
CDH1-212ENST00000611625 TSC1Q92574 1164 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 STX8Q9UNK0 236 aa14.18□□□□□ -0.14
CDH1-212ENST00000611625 ROBO2Q9HCK4 1378 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms