RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MOB2Q70IA6 237 aa27.34■■□□□ 1.97
CBWD3-207ENST00000611426 CERS5Q8N5B7 392 aa27.34■■□□□ 1.97
CBWD3-207ENST00000611426 PAPPA2Q9BXP8 1791 aa27.34■■□□□ 1.97
CBWD3-207ENST00000611426 DLGAP5Q15398 846 aa27.33■■□□□ 1.97
CBWD3-207ENST00000611426 APOBEC3FQ8IUX4 373 aaKnown RBP27.33■■□□□ 1.97
CBWD3-207ENST00000611426 ZBED3Q96IU2 234 aaPredicted RBP27.33■■□□□ 1.97
CBWD3-207ENST00000611426 PUS3Q9BZE2 481 aaKnown RBP27.33■■□□□ 1.97
CBWD3-207ENST00000611426 BICC1Q9H694 974 aaKnown RBP27.33■■□□□ 1.97
CBWD3-207ENST00000611426 CASP8AP2Q9UKL3 1982 aa27.32■■□□□ 1.96
CBWD3-207ENST00000611426 UBE2Q2LH0YL09 131 aa27.32■■□□□ 1.96
CBWD3-207ENST00000611426 RASAL3Q86YV0 1011 aa27.32■■□□□ 1.96
CBWD3-207ENST00000611426 CDCA7LQ96GN5 454 aa27.32■■□□□ 1.96
CBWD3-207ENST00000611426 JAG2Q9Y219 1238 aa27.32■■□□□ 1.96
CBWD3-207ENST00000611426 F8W031 263 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-207ENST00000611426 FKBP1AP62942 108 aaKnown RBP27.31■■□□□ 1.96
CBWD3-207ENST00000611426 UBE4AQ14139 1066 aa27.31■■□□□ 1.96
CBWD3-207ENST00000611426 CSRNP1Q96S65 589 aa27.31■■□□□ 1.96
CBWD3-207ENST00000611426 SAGE1Q9NXZ1 904 aa27.31■■□□□ 1.96
CBWD3-207ENST00000611426 RABL6Q3YEC7 729 aaPredicted RBP27.3■■□□□ 1.96
CBWD3-207ENST00000611426 ALDH1L2Q3SY69 923 aa27.29■■□□□ 1.96
CBWD3-207ENST00000611426 REM2Q8IYK8 340 aaPredicted RBP27.29■■□□□ 1.96
CBWD3-207ENST00000611426 MTMR14Q8NCE2 650 aa27.29■■□□□ 1.96
CBWD3-207ENST00000611426 RNF186Q9NXI6 227 aa27.29■■□□□ 1.96
CBWD3-207ENST00000611426 RIPOR2Q9Y4F9 1068 aa27.29■■□□□ 1.96
CBWD3-207ENST00000611426 MROH5Q6ZUA9 1318 aa27.29■■□□□ 1.96
CBWD3-207ENST00000611426 TRPA1O75762 1119 aa27.28■■□□□ 1.96
CBWD3-207ENST00000611426 HIBADHP31937 336 aaKnown RBP27.28■■□□□ 1.96
CBWD3-207ENST00000611426 TRMT2AQ8IZ69 625 aaKnown RBP27.28■■□□□ 1.96
CBWD3-207ENST00000611426 ANKRD44Q8N8A2 993 aa27.28■■□□□ 1.96
CBWD3-207ENST00000611426 AKAP11Q9UKA4 1901 aa27.28■■□□□ 1.96
CBWD3-207ENST00000611426 GYG1P46976 350 aa27.27■■□□□ 1.96
CBWD3-207ENST00000611426 CFAP100Q494V2 611 aa27.27■■□□□ 1.96
CBWD3-207ENST00000611426 USP44Q9H0E7 712 aa27.27■■□□□ 1.96
CBWD3-207ENST00000611426 MYO1BO43795 1136 aa27.26■■□□□ 1.95
CBWD3-207ENST00000611426 TDRD7Q8NHU6 1098 aaKnown RBP27.26■■□□□ 1.95
CBWD3-207ENST00000611426 FAM84BQ96KN1 310 aaPredicted RBP27.26■■□□□ 1.95
CBWD3-207ENST00000611426 DEFB129Q9H1M3 183 aa27.26■■□□□ 1.95
CBWD3-207ENST00000611426 SMC4Q9NTJ3 1288 aa27.26■■□□□ 1.95
CBWD3-207ENST00000611426 PCDHAC2Q9Y5I4 1007 aa27.26■■□□□ 1.95
CBWD3-207ENST00000611426 FAM205AQ6ZU69 1335 aa27.26■■□□□ 1.95
CBWD3-207ENST00000611426 PRKG1Q13976 671 aa27.25■■□□□ 1.95
CBWD3-207ENST00000611426 ARMC9Q7Z3E5 817 aa27.25■■□□□ 1.95
CBWD3-207ENST00000611426 RBM5P52756 815 aaKnown RBP eCLIP27.24■■□□□ 1.95
CBWD3-207ENST00000611426 LRRC24Q50LG9 513 aa27.24■■□□□ 1.95
CBWD3-207ENST00000611426 METTL24Q5JXM2 366 aa27.24■■□□□ 1.95
CBWD3-207ENST00000611426 PRMT6Q96LA8 375 aaPredicted RBP27.24■■□□□ 1.95
CBWD3-207ENST00000611426 SPDYE2BA6NHP3 402 aa27.23■■□□□ 1.95
CBWD3-207ENST00000611426 SPDYE6P0CI01 402 aa27.23■■□□□ 1.95
CBWD3-207ENST00000611426 MFSD14BQ5SR56 506 aa27.23■■□□□ 1.95
CBWD3-207ENST00000611426 MCOLN1Q9GZU1 580 aa27.23■■□□□ 1.95
CBWD3-207ENST00000611426 CLRN2A0PK11 232 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 CCDC85CA6NKD9 419 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 DGKZQ13574 1117 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 VPS37DQ86XT2 251 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 COL1A1P02452 1464 aaPredicted RBP27.22■■□□□ 1.95
CBWD3-207ENST00000611426 KLHDC4Q8TBB5 520 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 VEZTQ9HBM0 779 aa27.22■■□□□ 1.95
CBWD3-207ENST00000611426 ANGEL1Q9UNK9 670 aaKnown RBP27.22■■□□□ 1.95
CBWD3-207ENST00000611426 PDE8BO95263 885 aa27.21■■□□□ 1.95
CBWD3-207ENST00000611426 PTPN12Q05209 780 aaKnown RBP27.21■■□□□ 1.95
CBWD3-207ENST00000611426 TTF2Q9UNY4 1162 aaKnown RBP27.21■■□□□ 1.95
CBWD3-207ENST00000611426 PPP2R3BQ9Y5P8 575 aa27.21■■□□□ 1.95
CBWD3-207ENST00000611426 ECM29Q5VYK3 1845 aa27.2■■□□□ 1.95
CBWD3-207ENST00000611426 CT47B1P0C2W7 299 aaPredicted RBP27.2■■□□□ 1.94
CBWD3-207ENST00000611426 CAVIN4Q5BKX8 364 aa27.2■■□□□ 1.94
CBWD3-207ENST00000611426 FBXO33Q7Z6M2 555 aa27.2■■□□□ 1.94
CBWD3-207ENST00000611426 MKRN3Q13064 507 aaKnown RBP27.19■■□□□ 1.94
CBWD3-207ENST00000611426 SUPT16HQ9Y5B9 1047 aaKnown RBP27.19■■□□□ 1.94
CBWD3-207ENST00000611426 FRAT2O75474 233 aaPredicted RBP27.18■■□□□ 1.94
CBWD3-207ENST00000611426 LDLRAD1Q5T700 205 aa27.18■■□□□ 1.94
CBWD3-207ENST00000611426 VGLL2Q8N8G2 317 aa27.18■■□□□ 1.94
CBWD3-207ENST00000611426 SERPINA10Q9UK55 444 aa27.18■■□□□ 1.94
CBWD3-207ENST00000611426 NOB1Q9ULX3 412 aaKnown RBP27.18■■□□□ 1.94
CBWD3-207ENST00000611426 FZD1Q9UP38 647 aa27.18■■□□□ 1.94
CBWD3-207ENST00000611426 IQSEC3Q9UPP2 1182 aaPredicted RBP27.18■■□□□ 1.94
CBWD3-207ENST00000611426 AOX1Q06278 1338 aa27.17■■□□□ 1.94
CBWD3-207ENST00000611426 PPP1R12BO60237 982 aaPredicted RBP27.17■■□□□ 1.94
CBWD3-207ENST00000611426 SUPT20HL1Q3ZLR7 823 aa27.17■■□□□ 1.94
CBWD3-207ENST00000611426 TM4SF4P48230 202 aa27.16■■□□□ 1.94
CBWD3-207ENST00000611426 CHAF1AQ13111 956 aaPredicted RBP27.16■■□□□ 1.94
CBWD3-207ENST00000611426 NEFLP07196 543 aa27.15■■□□□ 1.94
CBWD3-207ENST00000611426 RASA3Q14644 834 aa27.14■■□□□ 1.94
CBWD3-207ENST00000611426 NBPF12Q5TAG4 269 aaPredicted RBP27.14■■□□□ 1.94
CBWD3-207ENST00000611426 SLC10A4Q96EP9 437 aa27.14■■□□□ 1.94
CBWD3-207ENST00000611426 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.14■■□□□ 1.94
CBWD3-207ENST00000611426 EYA2O00167 538 aa27.13■■□□□ 1.93
CBWD3-207ENST00000611426 IFIT1P09914 478 aaKnown RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 UBTFL1P0CB47 393 aaPredicted RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 RFX5P48382 616 aaPredicted RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 BCAMP50895 628 aa27.13■■□□□ 1.93
CBWD3-207ENST00000611426 SREBF2Q12772 1141 aa27.13■■□□□ 1.93
CBWD3-207ENST00000611426 PUM3Q15397 648 aaKnown RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 MAP3K11Q16584 847 aa27.13■■□□□ 1.93
CBWD3-207ENST00000611426 DZIP1LQ8IYY4 767 aaKnown RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 TBC1D22AQ8WUA7 517 aa27.13■■□□□ 1.93
CBWD3-207ENST00000611426 API5Q9BZZ5 524 aaKnown RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 TDRD3Q9H7E2 651 aaKnown RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 ZNF70Q9UC06 446 aaPredicted RBP27.13■■□□□ 1.93
CBWD3-207ENST00000611426 TBC1D8O95759 1140 aa27.12■■□□□ 1.93
CBWD3-207ENST00000611426 CRKP46108 304 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms