RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 FBXO46Q6PJ61 603 aaPredicted RBP28.74■■■□□ 2.19
LRMDA-215ENST00000611255 VAMP4O75379 141 aa28.73■■■□□ 2.19
LRMDA-215ENST00000611255 FANCIQ9NVI1 1328 aa28.72■■■□□ 2.19
LRMDA-215ENST00000611255 IL1R1P14778 569 aa28.72■■■□□ 2.19
LRMDA-215ENST00000611255 SSC5DA1L4H1 1573 aa28.71■■■□□ 2.19
LRMDA-215ENST00000611255 A0A1B0GUL6 1792 aa28.71■■■□□ 2.19
LRMDA-215ENST00000611255 IFIT5Q13325 482 aaKnown RBP28.71■■■□□ 2.19
LRMDA-215ENST00000611255 SLC10A4Q96EP9 437 aa28.71■■■□□ 2.19
LRMDA-215ENST00000611255 CFAP100Q494V2 611 aa28.7■■■□□ 2.18
LRMDA-215ENST00000611255 F6X3S4 739 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 F8W031 263 aaPredicted RBP28.69■■■□□ 2.18
LRMDA-215ENST00000611255 ALDH1A1P00352 501 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 INHBEP58166 350 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 FKBP1AP62942 108 aaKnown RBP28.69■■■□□ 2.18
LRMDA-215ENST00000611255 BEND3Q5T5X7 828 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 PRPF38BQ5VTL8 546 aaKnown RBP28.69■■■□□ 2.18
LRMDA-215ENST00000611255 ZNF804AQ7Z570 1209 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 CLMNQ96JQ2 1002 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 PRMT6Q96LA8 375 aaPredicted RBP28.69■■■□□ 2.18
LRMDA-215ENST00000611255 PCDH10Q9P2E7 1040 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 PPP2R3BQ9Y5P8 575 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 ECM29Q5VYK3 1845 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 AOX1Q06278 1338 aa28.69■■■□□ 2.18
LRMDA-215ENST00000611255 SPDYE2BA6NHP3 402 aa28.68■■■□□ 2.18
LRMDA-215ENST00000611255 MANSC4A6NHS7 340 aaPredicted RBP28.68■■■□□ 2.18
LRMDA-215ENST00000611255 PPP1R12BO60237 982 aaPredicted RBP28.68■■■□□ 2.18
LRMDA-215ENST00000611255 SPDYE6P0CI01 402 aa28.68■■■□□ 2.18
LRMDA-215ENST00000611255 IFNL1Q8IU54 200 aa28.68■■■□□ 2.18
LRMDA-215ENST00000611255 WNK4Q96J92 1243 aa28.68■■■□□ 2.18
LRMDA-215ENST00000611255 CHMP3Q9Y3E7 222 aa28.68■■■□□ 2.18
LRMDA-215ENST00000611255 CLRN2A0PK11 232 aa28.67■■■□□ 2.18
LRMDA-215ENST00000611255 EXOSC9Q06265 439 aaKnown RBP28.67■■■□□ 2.18
LRMDA-215ENST00000611255 EPHA10Q5JZY3 1008 aa28.67■■■□□ 2.18
LRMDA-215ENST00000611255 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.67■■■□□ 2.18
LRMDA-215ENST00000611255 ZBTB48P10074 688 aaPredicted RBP28.66■■■□□ 2.18
LRMDA-215ENST00000611255 LMBR1LQ6UX01 489 aa28.66■■■□□ 2.18
LRMDA-215ENST00000611255 ZNF594Q96JF6 807 aaPredicted RBP28.66■■■□□ 2.18
LRMDA-215ENST00000611255 JAG2Q9Y219 1238 aa28.66■■■□□ 2.18
LRMDA-215ENST00000611255 IGF2BP3O00425 579 aaKnown RBP eCLIP28.65■■■□□ 2.18
LRMDA-215ENST00000611255 SUPT20HL1Q3ZLR7 823 aa28.65■■■□□ 2.18
LRMDA-215ENST00000611255 NBPF12Q5TAG4 269 aaPredicted RBP28.65■■■□□ 2.18
LRMDA-215ENST00000611255 WDR63Q8IWG1 891 aa28.65■■■□□ 2.18
LRMDA-215ENST00000611255 UNCXA6NJT0 531 aa28.64■■■□□ 2.18
LRMDA-215ENST00000611255 MYO1BO43795 1136 aa28.64■■■□□ 2.18
LRMDA-215ENST00000611255 VEZTQ9HBM0 779 aa28.64■■■□□ 2.18
LRMDA-215ENST00000611255 HTTP42858 3142 aa28.63■■■□□ 2.17
LRMDA-215ENST00000611255 LAMB1P07942 1786 aa28.63■■■□□ 2.17
LRMDA-215ENST00000611255 USP2O75604 605 aaPredicted RBP28.63■■■□□ 2.17
LRMDA-215ENST00000611255 LDHAL6AQ6ZMR3 332 aa28.63■■■□□ 2.17
LRMDA-215ENST00000611255 SALL2Q9Y467 1007 aaPredicted RBP28.63■■■□□ 2.17
LRMDA-215ENST00000611255 PLIN1O60240 522 aa28.62■■■□□ 2.17
LRMDA-215ENST00000611255 CCDC57Q2TAC2 916 aa28.62■■■□□ 2.17
LRMDA-215ENST00000611255 GJA5P36382 358 aa28.61■■■□□ 2.17
LRMDA-215ENST00000611255 RASA3Q14644 834 aa28.61■■■□□ 2.17
LRMDA-215ENST00000611255 FAM205AQ6ZU69 1335 aa28.61■■■□□ 2.17
LRMDA-215ENST00000611255 GRM8O00222 908 aa28.6■■■□□ 2.17
LRMDA-215ENST00000611255 IREB2P48200 963 aaKnown RBP28.6■■■□□ 2.17
LRMDA-215ENST00000611255 RBM5P52756 815 aaKnown RBP eCLIP28.6■■■□□ 2.175e-6■■■■□ 21.2
LRMDA-215ENST00000611255 OTOP1Q7RTM1 612 aa28.6■■■□□ 2.17
LRMDA-215ENST00000611255 CNNM1Q9NRU3 951 aa28.6■■■□□ 2.17
LRMDA-215ENST00000611255 TRIM17Q9Y577 477 aa28.6■■■□□ 2.17
LRMDA-215ENST00000611255 TDRD7Q8NHU6 1098 aaKnown RBP28.59■■■□□ 2.17
LRMDA-215ENST00000611255 SPINK5Q9NQ38 1064 aaPredicted RBP28.59■■■□□ 2.17
LRMDA-215ENST00000611255 TAF7LQ5H9L4 462 aa28.58■■■□□ 2.17
LRMDA-215ENST00000611255 ANKRD13AQ8IZ07 590 aa28.57■■■□□ 2.16
LRMDA-215ENST00000611255 MRS2Q9HD23 443 aa28.57■■■□□ 2.16
LRMDA-215ENST00000611255 TESPA1A2RU30 521 aaPredicted RBP28.56■■■□□ 2.16
LRMDA-215ENST00000611255 UBE4AQ14139 1066 aa28.56■■■□□ 2.16
LRMDA-215ENST00000611255 SPDYE2Q495Y8 402 aa28.56■■■□□ 2.16
LRMDA-215ENST00000611255 MFSD14BQ5SR56 506 aa28.56■■■□□ 2.16
LRMDA-215ENST00000611255 FAM84BQ96KN1 310 aaPredicted RBP28.56■■■□□ 2.16
LRMDA-215ENST00000611255 PTPN18Q99952 460 aa28.56■■■□□ 2.16
LRMDA-215ENST00000611255 ZNF70Q9UC06 446 aaPredicted RBP28.56■■■□□ 2.16
LRMDA-215ENST00000611255 GYG1P46976 350 aa28.55■■■□□ 2.16
LRMDA-215ENST00000611255 CRHR2Q13324 411 aa28.55■■■□□ 2.16
LRMDA-215ENST00000611255 C9orf78Q9NZ63 289 aaPredicted RBP28.55■■■□□ 2.16
LRMDA-215ENST00000611255 SERPINA10Q9UK55 444 aa28.55■■■□□ 2.16
LRMDA-215ENST00000611255 TTF2Q9UNY4 1162 aaKnown RBP28.55■■■□□ 2.16
LRMDA-215ENST00000611255 CENPFP49454 3210 aa28.54■■■□□ 2.16
LRMDA-215ENST00000611255 ALDH1L1O75891 902 aa28.54■■■□□ 2.16
LRMDA-215ENST00000611255 HIBADHP31937 336 aaKnown RBP28.54■■■□□ 2.16
LRMDA-215ENST00000611255 OTUD7BQ6GQQ9 843 aa28.54■■■□□ 2.16
LRMDA-215ENST00000611255 ERO1AQ96HE7 468 aa28.54■■■□□ 2.16
LRMDA-215ENST00000611255 PUS3Q9BZE2 481 aaKnown RBP28.54■■■□□ 2.16
LRMDA-215ENST00000611255 TDRD3Q9H7E2 651 aaKnown RBP28.54■■■□□ 2.16
LRMDA-215ENST00000611255 MKI67P46013 3256 aaKnown RBP28.53■■■□□ 2.16
LRMDA-215ENST00000611255 TNFAIP1Q13829 316 aa28.53■■■□□ 2.16
LRMDA-215ENST00000611255 CD99L2Q8TCZ2 262 aa28.53■■■□□ 2.16
LRMDA-215ENST00000611255 KAZALD1Q96I82 304 aa28.53■■■□□ 2.16
LRMDA-215ENST00000611255 TEPSINQ96N21 525 aa28.53■■■□□ 2.16
LRMDA-215ENST00000611255 PTPN22Q9Y2R2 807 aa28.53■■■□□ 2.16
LRMDA-215ENST00000611255 POTEFA5A3E0 1075 aa28.52■■■□□ 2.16
LRMDA-215ENST00000611255 INTS3Q68E01 1043 aaKnown RBP28.52■■■□□ 2.16
LRMDA-215ENST00000611255 CDAN1Q8IWY9 1227 aa28.52■■■□□ 2.16
LRMDA-215ENST00000611255 DZIP1LQ8IYY4 767 aaKnown RBP28.52■■■□□ 2.16
LRMDA-215ENST00000611255 ELP3Q9H9T3 547 aa28.52■■■□□ 2.16
LRMDA-215ENST00000611255 OTOFQ9HC10 1997 aa28.51■■■□□ 2.16
LRMDA-215ENST00000611255 CAP1Q01518 475 aa28.51■■■□□ 2.15
LRMDA-215ENST00000611255 OPTNQ96CV9 577 aa28.51■■■□□ 2.15
LRMDA-215ENST00000611255 SUCLG2Q96I99 432 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms