RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
SENP3-209ENST00000610454 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
SENP3-209ENST00000610454 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
SENP3-209ENST00000610454 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
SENP3-209ENST00000610454 LPIN2Q92539 896 aa16.64■□□□□ 0.25
SENP3-209ENST00000610454 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
SENP3-209ENST00000610454 MTX1Q13505 466 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
SENP3-209ENST00000610454 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
SENP3-209ENST00000610454 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
SENP3-209ENST00000610454 DLGAP5Q15398 846 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 MFSD14BQ5SR56 506 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 CST9Q5W186 159 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
SENP3-209ENST00000610454 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 PCNTO95613 3336 aa16.62■□□□□ 0.25
SENP3-209ENST00000610454 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 WNT10BO00744 389 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 MYO1BO43795 1136 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 FGFR2P21802 821 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 ECE1P42892 770 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
SENP3-209ENST00000610454 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
SENP3-209ENST00000610454 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
SENP3-209ENST00000610454 RLBP1P12271 317 aa16.6■□□□□ 0.25
SENP3-209ENST00000610454 BCAMP50895 628 aa16.6■□□□□ 0.25
SENP3-209ENST00000610454 GRM1Q13255 1194 aa16.6■□□□□ 0.25
SENP3-209ENST00000610454 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
SENP3-209ENST00000610454 GNL3LQ9NVN8 582 aaKnown RBP16.6■□□□□ 0.25
SENP3-209ENST00000610454 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
SENP3-209ENST00000610454 VEGFBP49765 207 aa16.59■□□□□ 0.25
SENP3-209ENST00000610454 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
SENP3-209ENST00000610454 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
SENP3-209ENST00000610454 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
SENP3-209ENST00000610454 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
SENP3-209ENST00000610454 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
SENP3-209ENST00000610454 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
SENP3-209ENST00000610454 NF2P35240 595 aa16.58■□□□□ 0.24
SENP3-209ENST00000610454 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
SENP3-209ENST00000610454 CFAP100Q494V2 611 aa16.58■□□□□ 0.24
SENP3-209ENST00000610454 SAPCD2Q86UD0 394 aa16.58■□□□□ 0.24
SENP3-209ENST00000610454 CDCA5Q96FF9 252 aa16.58■□□□□ 0.24
SENP3-209ENST00000610454 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
SENP3-209ENST00000610454 GBA2Q9HCG7 927 aaPredicted RBP16.58■□□□□ 0.24
SENP3-209ENST00000610454 MAST3O60307 1309 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
SENP3-209ENST00000610454 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 HUNKP57058 714 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 DLK2Q6UY11 383 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 MTMR14Q8NCE2 650 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 CAPNS2Q96L46 248 aa16.57■□□□□ 0.24
SENP3-209ENST00000610454 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
SENP3-209ENST00000610454 TFCP2Q12800 502 aa16.56■□□□□ 0.24
SENP3-209ENST00000610454 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
SENP3-209ENST00000610454 AIDAQ96BJ3 306 aa16.56■□□□□ 0.24
SENP3-209ENST00000610454 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
SENP3-209ENST00000610454 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
SENP3-209ENST00000610454 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
SENP3-209ENST00000610454 SPDYE2BA6NHP3 402 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 SPDYE6P0CI01 402 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
SENP3-209ENST00000610454 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
SENP3-209ENST00000610454 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
SENP3-209ENST00000610454 SCAF8Q9UPN6 1271 aaKnown RBP16.55■□□□□ 0.24
SENP3-209ENST00000610454 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
SENP3-209ENST00000610454 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
SENP3-209ENST00000610454 SEMA3EO15041 775 aa16.54■□□□□ 0.24
SENP3-209ENST00000610454 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
SENP3-209ENST00000610454 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
SENP3-209ENST00000610454 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
SENP3-209ENST00000610454 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
SENP3-209ENST00000610454 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
SENP3-209ENST00000610454 SUGT1Q9Y2Z0 365 aa16.54■□□□□ 0.24
SENP3-209ENST00000610454 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
SENP3-209ENST00000610454 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
SENP3-209ENST00000610454 PHKA1P46020 1223 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 CRKP46108 304 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 TIMM10P62072 90 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 FKBP1BP68106 108 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
SENP3-209ENST00000610454 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms