RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 GMLQ99445 158 aa18.47■□□□□ 0.55
CSNK2A1-209ENST00000609606 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
CSNK2A1-209ENST00000609606 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
CSNK2A1-209ENST00000609606 SEMA3EO15041 775 aa18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
CSNK2A1-209ENST00000609606 PHKA1P46020 1223 aa18.45■□□□□ 0.54
CSNK2A1-209ENST00000609606 MMP14P50281 582 aa18.45■□□□□ 0.54
CSNK2A1-209ENST00000609606 CCDC102BQ68D86 513 aa18.45■□□□□ 0.54
CSNK2A1-209ENST00000609606 FRAT2O75474 233 aaPredicted RBP18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 EPHX2P34913 555 aa18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 EPS15P42566 896 aa18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 EAF2Q96CJ1 260 aaPredicted RBP18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
CSNK2A1-209ENST00000609606 H7C1D1 291 aa18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 CLASRPQ8N2M8 674 aaKnown RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 TBC1D22AQ8WUA7 517 aa18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 ADARB2Q9NS39 739 aaKnown RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 IQSEC3Q9UPP2 1182 aaPredicted RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
CSNK2A1-209ENST00000609606 USP17L8P0C7I0 530 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 USP50Q70EL3 339 aaPredicted RBP18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 CERS5Q8N5B7 392 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 MXD3Q9BW11 206 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 DBNLQ9UJU6 430 aaKnown RBP18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 ADAMTSL1Q8N6G6 1762 aa18.42■□□□□ 0.54
CSNK2A1-209ENST00000609606 COL1A1P02452 1464 aaPredicted RBP18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 ARID4AP29374 1257 aaPredicted RBP18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 MFSD14BQ5SR56 506 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 AACSQ86V21 672 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 WDR66Q8TBY9 1149 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 DBNDD2Q9BQY9 259 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 AKAP11Q9UKA4 1901 aa18.41■□□□□ 0.54
CSNK2A1-209ENST00000609606 APBB1O00213 710 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 TOMM70O94826 608 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 RASGRF1Q13972 1273 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 SUGT1Q9Y2Z0 365 aa18.4■□□□□ 0.54
CSNK2A1-209ENST00000609606 SHTN1A0MZ66 631 aa18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 TLR7Q9NYK1 1049 aaKnown RBP18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
CSNK2A1-209ENST00000609606 IFIT2P09913 472 aaKnown RBP18.38■□□□□ 0.53
CSNK2A1-209ENST00000609606 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
CSNK2A1-209ENST00000609606 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
CSNK2A1-209ENST00000609606 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 TRPM4Q8TD43 1214 aa18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 ZC3H15Q8WU90 426 aaKnown RBP18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
CSNK2A1-209ENST00000609606 MCAMP43121 646 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 EAPPQ56P03 285 aaPredicted RBP18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 SPATA5Q8NB90 893 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 PGAP2Q9UHJ9 254 aa18.36■□□□□ 0.53
CSNK2A1-209ENST00000609606 POLR2AP24928 1970 aaKnown RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 MAST3O60307 1309 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 EGFRP00533 1210 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 HIRAP54198 1017 aaPredicted RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 HDLBPQ00341 1268 aaKnown RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 FSTL1Q12841 308 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 SCARF1Q14162 830 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 MTMR14Q8NCE2 650 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 SMC1BQ8NDV3 1235 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 MRIQ9BWK5 157 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
CSNK2A1-209ENST00000609606 IGHDP01880 384 aa18.34■□□□□ 0.53
CSNK2A1-209ENST00000609606 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
CSNK2A1-209ENST00000609606 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
CSNK2A1-209ENST00000609606 CHADLQ6NUI6 762 aa18.34■□□□□ 0.53
CSNK2A1-209ENST00000609606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
CSNK2A1-209ENST00000609606 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 307.3 ms