RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 ECM29Q5VYK3 1845 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 TMEM265A0A087WTH1 108 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
LINC01396-201ENST00000609099 GNRH1P01148 92 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 GJB1P08034 283 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 CAPN2P17655 700 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 BRI3BPQ8WY22 251 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 GDF15Q99988 308 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 ZFYVE28Q9HCC9 887 aa10.82□□□□□ -0.68
LINC01396-201ENST00000609099 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
LINC01396-201ENST00000609099 PER1O15534 1290 aaPredicted RBP10.81□□□□□ -0.68
LINC01396-201ENST00000609099 BCAMP50895 628 aa10.81□□□□□ -0.68
LINC01396-201ENST00000609099 DACT2Q5SW24 774 aa10.81□□□□□ -0.68
LINC01396-201ENST00000609099 ZC3H12CQ9C0D7 883 aaKnown RBP10.81□□□□□ -0.68
LINC01396-201ENST00000609099 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
LINC01396-201ENST00000609099 PODXL2Q9NZ53 605 aa10.81□□□□□ -0.68
LINC01396-201ENST00000609099 CHD9Q3L8U1 2897 aa10.81□□□□□ -0.68
LINC01396-201ENST00000609099 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
LINC01396-201ENST00000609099 SPEF2Q9C093 1822 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 FAM109BQ6ICB4 259 aaPredicted RBP10.8□□□□□ -0.68
LINC01396-201ENST00000609099 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 TDHQ8IZJ6 230 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 FAM43AQ8N2R8 423 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 RNF208Q9H0X6 261 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
LINC01396-201ENST00000609099 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
LINC01396-201ENST00000609099 NCOR1O75376 2440 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 IRS2Q9Y4H2 1338 aa10.8□□□□□ -0.68
LINC01396-201ENST00000609099 PIEZO1Q92508 2521 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 UNCXA6NJT0 531 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 PPP1R12BO60237 982 aaPredicted RBP10.79□□□□□ -0.68
LINC01396-201ENST00000609099 UFL1O94874 794 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 HOXD10P28358 340 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 UBXN2AP68543 259 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 SF3B3Q15393 1217 aaKnown RBP10.79□□□□□ -0.68
LINC01396-201ENST00000609099 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
LINC01396-201ENST00000609099 HSPA5P11021 654 aaKnown RBP10.78□□□□□ -0.68
LINC01396-201ENST00000609099 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
LINC01396-201ENST00000609099 TAF7Q15545 349 aaPredicted RBP10.78□□□□□ -0.68
LINC01396-201ENST00000609099 TAF1CQ15572 869 aaPredicted RBP10.78□□□□□ -0.68
LINC01396-201ENST00000609099 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
LINC01396-201ENST00000609099 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
LINC01396-201ENST00000609099 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
LINC01396-201ENST00000609099 USP2O75604 605 aaPredicted RBP10.77□□□□□ -0.69
LINC01396-201ENST00000609099 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.69
LINC01396-201ENST00000609099 CCL5P13501 91 aa10.77□□□□□ -0.69
LINC01396-201ENST00000609099 KLRK1P26718 216 aa10.77□□□□□ -0.69
LINC01396-201ENST00000609099 MAFAQ8NHW3 353 aaPredicted RBP10.77□□□□□ -0.69
LINC01396-201ENST00000609099 RAET1EQ8TD07 263 aa10.77□□□□□ -0.69
LINC01396-201ENST00000609099 FAM89AQ96GI7 184 aa10.77□□□□□ -0.69
LINC01396-201ENST00000609099 SNX27Q96L92 541 aa10.77□□□□□ -0.69
LINC01396-201ENST00000609099 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
LINC01396-201ENST00000609099 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.69
LINC01396-201ENST00000609099 COL1A1P02452 1464 aaPredicted RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 USP17L3A6NCW0 530 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 USP17L4A6NCW7 530 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 GRK4P32298 578 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 USP17L1Q7RTZ2 530 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 APOBEC3FQ8IUX4 373 aaKnown RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
LINC01396-201ENST00000609099 KNSTRNQ9Y448 316 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 ADGRA2Q96PE1 1338 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 CHD7Q9P2D1 2997 aa10.76□□□□□ -0.69
LINC01396-201ENST00000609099 SGPL1O95470 568 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 LACTBP83111 547 aaPredicted RBP10.75□□□□□ -0.69
LINC01396-201ENST00000609099 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 CC2D1BQ5T0F9 858 aaKnown RBP10.75□□□□□ -0.69
LINC01396-201ENST00000609099 ZNF697Q5TEC3 545 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 CERS5Q8N5B7 392 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 XAGE3Q8WTP9 111 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 FAM161BQ96MY7 647 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 ISCA1Q9BUE6 129 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
LINC01396-201ENST00000609099 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
LINC01396-201ENST00000609099 MGAMO43451 1857 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 IREB2P48200 963 aaKnown RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 MMP14P50281 582 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 RPS8P62241 208 aaKnown RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 COPS6Q7L5N1 327 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
LINC01396-201ENST00000609099 ARAP2Q8WZ64 1704 aa10.74□□□□□ -0.69
LINC01396-201ENST00000609099 A0A1B0GUL6 1792 aa10.73□□□□□ -0.69
LINC01396-201ENST00000609099 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
LINC01396-201ENST00000609099 KRT24Q2M2I5 525 aa10.73□□□□□ -0.69
LINC01396-201ENST00000609099 SUPT20HL1Q3ZLR7 823 aa10.73□□□□□ -0.69
LINC01396-201ENST00000609099 NECAB2Q7Z6G3 386 aa10.73□□□□□ -0.69
LINC01396-201ENST00000609099 C7orf61Q8IZ16 206 aa10.73□□□□□ -0.69
LINC01396-201ENST00000609099 OPTNQ96CV9 577 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms