RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CFAP100Q494V2 611 aa18.83■□□□□ 0.6
CTSA-216ENST00000607212 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
CTSA-216ENST00000607212 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.6
CTSA-216ENST00000607212 ZNF296Q8WUU4 475 aaPredicted RBP18.83■□□□□ 0.6
CTSA-216ENST00000607212 ZNF594Q96JF6 807 aaPredicted RBP18.83■□□□□ 0.6
CTSA-216ENST00000607212 DEFB129Q9H1M3 183 aa18.83■□□□□ 0.6
CTSA-216ENST00000607212 FZD1Q9UP38 647 aa18.83■□□□□ 0.6
CTSA-216ENST00000607212 ECM29Q5VYK3 1845 aa18.83■□□□□ 0.6
CTSA-216ENST00000607212 GRM8O00222 908 aa18.82■□□□□ 0.6
CTSA-216ENST00000607212 FOXO4P98177 505 aa18.82■□□□□ 0.6
CTSA-216ENST00000607212 BEND3Q5T5X7 828 aa18.82■□□□□ 0.6
CTSA-216ENST00000607212 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
CTSA-216ENST00000607212 PPP1R12BO60237 982 aaPredicted RBP18.81■□□□□ 0.6
CTSA-216ENST00000607212 TM4SF4P48230 202 aa18.81■□□□□ 0.6
CTSA-216ENST00000607212 SLC10A4Q96EP9 437 aa18.81■□□□□ 0.6
CTSA-216ENST00000607212 HPS5Q9UPZ3 1129 aa18.81■□□□□ 0.6
CTSA-216ENST00000607212 COL1A1P02452 1464 aaPredicted RBP18.81■□□□□ 0.6
CTSA-216ENST00000607212 GPR25O00155 361 aa18.8■□□□□ 0.6
CTSA-216ENST00000607212 PKN2Q16513 984 aaKnown RBP18.8■□□□□ 0.6
CTSA-216ENST00000607212 CERS5Q8N5B7 392 aa18.8■□□□□ 0.6
CTSA-216ENST00000607212 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
CTSA-216ENST00000607212 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
CTSA-216ENST00000607212 SPRYD7Q5W111 196 aa18.79■□□□□ 0.6
CTSA-216ENST00000607212 C15orf52Q6ZUT6 534 aaKnown RBP18.79■□□□□ 0.6
CTSA-216ENST00000607212 ZBED3Q96IU2 234 aaPredicted RBP18.79■□□□□ 0.6
CTSA-216ENST00000607212 SRCIN1Q9C0H9 1055 aa18.79■□□□□ 0.6
CTSA-216ENST00000607212 PPP2R3BQ9Y5P8 575 aa18.79■□□□□ 0.6
CTSA-216ENST00000607212 FKTNO75072 461 aa18.78■□□□□ 0.6
CTSA-216ENST00000607212 IL1R1P14778 569 aa18.78■□□□□ 0.6
CTSA-216ENST00000607212 SUPT20HL1Q3ZLR7 823 aa18.78■□□□□ 0.6
CTSA-216ENST00000607212 SPDYE2BA6NHP3 402 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 MANSC4A6NHS7 340 aaPredicted RBP18.77■□□□□ 0.6
CTSA-216ENST00000607212 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 ALDH1A1P00352 501 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 SPDYE6P0CI01 402 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 IREB2P48200 963 aaKnown RBP18.77■□□□□ 0.6
CTSA-216ENST00000607212 VPS37DQ86XT2 251 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 MTMR14Q8NCE2 650 aa18.77■□□□□ 0.6
CTSA-216ENST00000607212 PRMT6Q96LA8 375 aaPredicted RBP18.77■□□□□ 0.6
CTSA-216ENST00000607212 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
CTSA-216ENST00000607212 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
CTSA-216ENST00000607212 FKBP1AP62942 108 aaKnown RBP18.76■□□□□ 0.59
CTSA-216ENST00000607212 MFSD14BQ5SR56 506 aa18.76■□□□□ 0.59
CTSA-216ENST00000607212 LDLRAD1Q5T700 205 aa18.76■□□□□ 0.59
CTSA-216ENST00000607212 TTF2Q9UNY4 1162 aaKnown RBP18.76■□□□□ 0.59
CTSA-216ENST00000607212 IRS2Q9Y4H2 1338 aa18.75■□□□□ 0.59
CTSA-216ENST00000607212 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
CTSA-216ENST00000607212 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
CTSA-216ENST00000607212 GYG1P46976 350 aa18.75■□□□□ 0.59
CTSA-216ENST00000607212 NBPF12Q5TAG4 269 aaPredicted RBP18.75■□□□□ 0.59
CTSA-216ENST00000607212 WNK4Q96J92 1243 aa18.75■□□□□ 0.59
CTSA-216ENST00000607212 CLMNQ96JQ2 1002 aa18.75■□□□□ 0.59
CTSA-216ENST00000607212 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
CTSA-216ENST00000607212 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
CTSA-216ENST00000607212 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
CTSA-216ENST00000607212 UBE4AQ14139 1066 aa18.74■□□□□ 0.59
CTSA-216ENST00000607212 FBXO46Q6PJ61 603 aaPredicted RBP18.74■□□□□ 0.59
CTSA-216ENST00000607212 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
CTSA-216ENST00000607212 SLC34A2O95436 690 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 ZBTB48P10074 688 aaPredicted RBP18.73■□□□□ 0.59
CTSA-216ENST00000607212 INHBEP58166 350 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 RASA3Q14644 834 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 IFNL1Q8IU54 200 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
CTSA-216ENST00000607212 R3HDMLQ9H3Y0 253 aa18.73■□□□□ 0.59
CTSA-216ENST00000607212 SSC5DA1L4H1 1573 aa18.72■□□□□ 0.59
CTSA-216ENST00000607212 MAP3K11Q16584 847 aa18.72■□□□□ 0.59
CTSA-216ENST00000607212 NOM1Q5C9Z4 860 aaKnown RBP18.72■□□□□ 0.59
CTSA-216ENST00000607212 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
CTSA-216ENST00000607212 TDRD3Q9H7E2 651 aaKnown RBP18.72■□□□□ 0.59
CTSA-216ENST00000607212 IQSEC3Q9UPP2 1182 aaPredicted RBP18.72■□□□□ 0.59
CTSA-216ENST00000607212 TRIM17Q9Y577 477 aa18.72■□□□□ 0.59
CTSA-216ENST00000607212 TCP10L2B9ZVM9 353 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 TNNI2P48788 182 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 ANKRD13AQ8IZ07 590 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 ZNF70Q9UC06 446 aaPredicted RBP18.71■□□□□ 0.59
CTSA-216ENST00000607212 AOX1Q06278 1338 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
CTSA-216ENST00000607212 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
CTSA-216ENST00000607212 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
CTSA-216ENST00000607212 PDE4DIPQ5VU43 2346 aa18.7■□□□□ 0.58
CTSA-216ENST00000607212 TDRD7Q8NHU6 1098 aaKnown RBP18.7■□□□□ 0.58
CTSA-216ENST00000607212 ARAP2Q8WZ64 1704 aa18.7■□□□□ 0.58
CTSA-216ENST00000607212 FAM84BQ96KN1 310 aaPredicted RBP18.7■□□□□ 0.58
CTSA-216ENST00000607212 BICC1Q9H694 974 aaKnown RBP18.7■□□□□ 0.58
CTSA-216ENST00000607212 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
CTSA-216ENST00000607212 IGF2BP3O00425 579 aaKnown RBP eCLIP18.69■□□□□ 0.58
CTSA-216ENST00000607212 USP2O75604 605 aaPredicted RBP18.69■□□□□ 0.58
CTSA-216ENST00000607212 CRKP46108 304 aa18.69■□□□□ 0.58
CTSA-216ENST00000607212 SPDYE2Q495Y8 402 aa18.69■□□□□ 0.58
CTSA-216ENST00000607212 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
CTSA-216ENST00000607212 CFHR5Q9BXR6 569 aa18.69■□□□□ 0.58
CTSA-216ENST00000607212 UNCXA6NJT0 531 aa18.68■□□□□ 0.58
CTSA-216ENST00000607212 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
CTSA-216ENST00000607212 ERO1AQ96HE7 468 aa18.68■□□□□ 0.58
CTSA-216ENST00000607212 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
CTSA-216ENST00000607212 OTOFQ9HC10 1997 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms