RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 FMR1Q06787 632 aaKnown RBP eCLIP20.56■□□□□ 0.88
LINC00240-203ENST00000606878 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
LINC00240-203ENST00000606878 G3BP1Q13283 466 aaKnown RBP eCLIP20.55■□□□□ 0.88
LINC00240-203ENST00000606878 ATP2B3Q16720 1220 aa20.55■□□□□ 0.88
LINC00240-203ENST00000606878 SULF1Q8IWU6 871 aa20.55■□□□□ 0.88
LINC00240-203ENST00000606878 CERS5Q8N5B7 392 aa20.55■□□□□ 0.88
LINC00240-203ENST00000606878 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
LINC00240-203ENST00000606878 PNMA6EA0A0J9YXQ4 647 aa20.54■□□□□ 0.88
LINC00240-203ENST00000606878 CST9Q5W186 159 aa20.54■□□□□ 0.88
LINC00240-203ENST00000606878 ABT1Q9ULW3 272 aaKnown RBP20.54■□□□□ 0.88
LINC00240-203ENST00000606878 IQSEC3Q9UPP2 1182 aaPredicted RBP20.54■□□□□ 0.88
LINC00240-203ENST00000606878 CEP350Q5VT06 3117 aa20.54■□□□□ 0.88
LINC00240-203ENST00000606878 CELF2O95319 508 aaKnown RBP20.53■□□□□ 0.88
LINC00240-203ENST00000606878 NBPF9Q3BBW0 867 aa20.53■□□□□ 0.88
LINC00240-203ENST00000606878 MFSD14BQ5SR56 506 aa20.53■□□□□ 0.88
LINC00240-203ENST00000606878 ANGEL2Q5VTE6 544 aaKnown RBP20.53■□□□□ 0.88
LINC00240-203ENST00000606878 YTHDC1Q96MU7 727 aaKnown RBP20.53■□□□□ 0.88
LINC00240-203ENST00000606878 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
LINC00240-203ENST00000606878 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
LINC00240-203ENST00000606878 GGA3Q9NZ52 723 aa20.53■□□□□ 0.88
LINC00240-203ENST00000606878 MKRN1Q9UHC7 482 aaKnown RBP20.53■□□□□ 0.88
LINC00240-203ENST00000606878 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
LINC00240-203ENST00000606878 F8W031 263 aaPredicted RBP20.52■□□□□ 0.88
LINC00240-203ENST00000606878 WNT10BO00744 389 aa20.52■□□□□ 0.88
LINC00240-203ENST00000606878 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
LINC00240-203ENST00000606878 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
LINC00240-203ENST00000606878 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
LINC00240-203ENST00000606878 TBC1D22AQ8WUA7 517 aa20.52■□□□□ 0.88
LINC00240-203ENST00000606878 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
LINC00240-203ENST00000606878 ASTN2O75129 1339 aaPredicted RBP20.52■□□□□ 0.87
LINC00240-203ENST00000606878 TIMM10P62072 90 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 TFCP2Q12800 502 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 POLA2Q14181 598 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 ZNF408Q9H9D4 720 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
LINC00240-203ENST00000606878 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
LINC00240-203ENST00000606878 MVPQ14764 893 aaKnown RBP20.5■□□□□ 0.87
LINC00240-203ENST00000606878 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
LINC00240-203ENST00000606878 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
LINC00240-203ENST00000606878 COG6Q9Y2V7 657 aa20.5■□□□□ 0.87
LINC00240-203ENST00000606878 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
LINC00240-203ENST00000606878 ADM5C9JUS6 153 aa20.49■□□□□ 0.87
LINC00240-203ENST00000606878 SURF6O75683 361 aaKnown RBP20.49■□□□□ 0.87
LINC00240-203ENST00000606878 RBM5P52756 815 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC00240-203ENST00000606878 DLK2Q6UY11 383 aa20.49■□□□□ 0.87
LINC00240-203ENST00000606878 JMYQ8N9B5 988 aa20.49■□□□□ 0.87
LINC00240-203ENST00000606878 RASSF10A6NK89 507 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 MYO1BO43795 1136 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 OS9Q13438 667 aaPredicted RBP20.48■□□□□ 0.87
LINC00240-203ENST00000606878 CFAP100Q494V2 611 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 WDR66Q8TBY9 1149 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
LINC00240-203ENST00000606878 NEUROD6Q96NK8 337 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 PSME4Q14997 1843 aa20.48■□□□□ 0.87
LINC00240-203ENST00000606878 A0A1B0GUL7 405 aa20.47■□□□□ 0.87
LINC00240-203ENST00000606878 C2orf69Q8N8R5 385 aa20.47■□□□□ 0.87
LINC00240-203ENST00000606878 SERPINA10Q9UK55 444 aa20.47■□□□□ 0.87
LINC00240-203ENST00000606878 SUGT1Q9Y2Z0 365 aa20.47■□□□□ 0.87
LINC00240-203ENST00000606878 TLL2Q9Y6L7 1015 aa20.47■□□□□ 0.87
LINC00240-203ENST00000606878 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
LINC00240-203ENST00000606878 SEMA3EO15041 775 aa20.46■□□□□ 0.87
LINC00240-203ENST00000606878 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
LINC00240-203ENST00000606878 XAGE2Q96GT9 111 aa20.46■□□□□ 0.87
LINC00240-203ENST00000606878 PRMT6Q96LA8 375 aaPredicted RBP20.46■□□□□ 0.87
LINC00240-203ENST00000606878 NOP58Q9Y2X3 529 aaKnown RBP20.46■□□□□ 0.87
LINC00240-203ENST00000606878 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 SPDYE2BA6NHP3 402 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 SPDYE6P0CI01 402 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 ADORA1P30542 326 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 VEGFBP49765 207 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 GORABQ5T7V8 394 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 CCDC102BQ68D86 513 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 PAXIP1Q6ZW49 1069 aaPredicted RBP20.45■□□□□ 0.86
LINC00240-203ENST00000606878 SAPCD2Q86UD0 394 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
LINC00240-203ENST00000606878 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 MRIQ9BWK5 157 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 ZBTB40Q9NUA8 1239 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 DENND2AQ9ULE3 1009 aa20.45■□□□□ 0.86
LINC00240-203ENST00000606878 ECE1P42892 770 aa20.44■□□□□ 0.86
LINC00240-203ENST00000606878 PHKA1P46020 1223 aa20.44■□□□□ 0.86
LINC00240-203ENST00000606878 HDLBPQ00341 1268 aaKnown RBP20.44■□□□□ 0.86
LINC00240-203ENST00000606878 RPAP2Q8IXW5 612 aaPredicted RBP20.44■□□□□ 0.86
LINC00240-203ENST00000606878 GBA2Q9HCG7 927 aaPredicted RBP20.44■□□□□ 0.86
LINC00240-203ENST00000606878 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
LINC00240-203ENST00000606878 ZBTB22O15209 634 aa20.43■□□□□ 0.86
LINC00240-203ENST00000606878 GRIK5Q16478 980 aa20.43■□□□□ 0.86
LINC00240-203ENST00000606878 HHIPL1Q96JK4 782 aa20.43■□□□□ 0.86
LINC00240-203ENST00000606878 GPR108Q9NPR9 543 aa20.43■□□□□ 0.86
LINC00240-203ENST00000606878 SCAF8Q9UPN6 1271 aaKnown RBP20.43■□□□□ 0.86
LINC00240-203ENST00000606878 PCDHAC2Q9Y5I4 1007 aa20.43■□□□□ 0.86
LINC00240-203ENST00000606878 CRKP46108 304 aa20.42■□□□□ 0.86
LINC00240-203ENST00000606878 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
LINC00240-203ENST00000606878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
LINC00240-203ENST00000606878 HMMRO75330 724 aa20.41■□□□□ 0.86
LINC00240-203ENST00000606878 NF2P35240 595 aa20.41■□□□□ 0.86
LINC00240-203ENST00000606878 HUNKP57058 714 aa20.41■□□□□ 0.86
LINC00240-203ENST00000606878 PRAMEF18Q5VWM3 479 aa20.41■□□□□ 0.86
LINC00240-203ENST00000606878 TEKT1Q969V4 418 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms