RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
CTSA-213ENST00000606782 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
CTSA-213ENST00000606782 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
CTSA-213ENST00000606782 FAM205AQ6ZU69 1335 aa16.79■□□□□ 0.28
CTSA-213ENST00000606782 SLC10A3P09131 477 aa16.79■□□□□ 0.28
CTSA-213ENST00000606782 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
CTSA-213ENST00000606782 PUS3Q9BZE2 481 aaKnown RBP16.79■□□□□ 0.28
CTSA-213ENST00000606782 MROH5Q6ZUA9 1318 aa16.78■□□□□ 0.28
CTSA-213ENST00000606782 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
CTSA-213ENST00000606782 FAM84BQ96KN1 310 aaPredicted RBP16.78■□□□□ 0.28
CTSA-213ENST00000606782 PLIN1O60240 522 aa16.77■□□□□ 0.28
CTSA-213ENST00000606782 KIF23Q02241 960 aaPredicted RBP16.77■□□□□ 0.28
CTSA-213ENST00000606782 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.28
CTSA-213ENST00000606782 SAGE1Q9NXZ1 904 aa16.77■□□□□ 0.28
CTSA-213ENST00000606782 CAPN15O75808 1086 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 HIBADHP31937 336 aaKnown RBP16.76■□□□□ 0.27
CTSA-213ENST00000606782 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
CTSA-213ENST00000606782 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
CTSA-213ENST00000606782 COL1A1P02452 1464 aaPredicted RBP16.75■□□□□ 0.27
CTSA-213ENST00000606782 FBXO33Q7Z6M2 555 aa16.75■□□□□ 0.27
CTSA-213ENST00000606782 CSRNP1Q96S65 589 aa16.75■□□□□ 0.27
CTSA-213ENST00000606782 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
CTSA-213ENST00000606782 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 NF2P35240 595 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 GYG1P46976 350 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 MOB2Q70IA6 237 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
CTSA-213ENST00000606782 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 PDE8BO95263 885 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 RFX5P48382 616 aaPredicted RBP16.73■□□□□ 0.27
CTSA-213ENST00000606782 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 PRMT6Q96LA8 375 aaPredicted RBP16.73■□□□□ 0.27
CTSA-213ENST00000606782 DEFB129Q9H1M3 183 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 CASP8AP2Q9UKL3 1982 aa16.73■□□□□ 0.27
CTSA-213ENST00000606782 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
CTSA-213ENST00000606782 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
CTSA-213ENST00000606782 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
CTSA-213ENST00000606782 MFSD14BQ5SR56 506 aa16.72■□□□□ 0.27
CTSA-213ENST00000606782 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
CTSA-213ENST00000606782 ECM29Q5VYK3 1845 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 MYO1BO43795 1136 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 FGFR2P21802 821 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.27
CTSA-213ENST00000606782 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 NOB1Q9ULX3 412 aaKnown RBP16.71■□□□□ 0.27
CTSA-213ENST00000606782 JAG2Q9Y219 1238 aa16.71■□□□□ 0.27
CTSA-213ENST00000606782 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
CTSA-213ENST00000606782 F8W031 263 aaPredicted RBP16.7■□□□□ 0.26
CTSA-213ENST00000606782 EYA2O00167 538 aa16.7■□□□□ 0.26
CTSA-213ENST00000606782 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
CTSA-213ENST00000606782 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
CTSA-213ENST00000606782 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
CTSA-213ENST00000606782 TRPA1O75762 1119 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 TM4SF4P48230 202 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
CTSA-213ENST00000606782 TTLL12Q14166 644 aaPredicted RBP16.69■□□□□ 0.26
CTSA-213ENST00000606782 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 TTF2Q9UNY4 1162 aaKnown RBP16.69■□□□□ 0.26
CTSA-213ENST00000606782 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 AOX1Q06278 1338 aa16.69■□□□□ 0.26
CTSA-213ENST00000606782 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
CTSA-213ENST00000606782 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
CTSA-213ENST00000606782 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
CTSA-213ENST00000606782 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
CTSA-213ENST00000606782 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
CTSA-213ENST00000606782 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
CTSA-213ENST00000606782 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
CTSA-213ENST00000606782 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 CLRN2A0PK11 232 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 CIAO1O76071 339 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
CTSA-213ENST00000606782 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
CTSA-213ENST00000606782 ANGEL1Q9UNK9 670 aaKnown RBP16.67■□□□□ 0.26
CTSA-213ENST00000606782 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 SSC5DA1L4H1 1573 aa16.67■□□□□ 0.26
CTSA-213ENST00000606782 ZBTB22O15209 634 aa16.66■□□□□ 0.26
CTSA-213ENST00000606782 PPP1R12BO60237 982 aaPredicted RBP16.66■□□□□ 0.26
CTSA-213ENST00000606782 BCAMP50895 628 aa16.66■□□□□ 0.26
CTSA-213ENST00000606782 GRIK5Q16478 980 aa16.66■□□□□ 0.26
CTSA-213ENST00000606782 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
CTSA-213ENST00000606782 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
CTSA-213ENST00000606782 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
CTSA-213ENST00000606782 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
CTSA-213ENST00000606782 LPIN2Q92539 896 aa16.66■□□□□ 0.26
CTSA-213ENST00000606782 BCAR3O75815 825 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms