RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 RPS12P25398 132 aaKnown RBP17.58■□□□□ 0.4
CTSA-211ENST00000606066 TIMM10P62072 90 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 FBXW7Q969H0 707 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 GNL3LQ9NVN8 582 aaKnown RBP17.58■□□□□ 0.4
CTSA-211ENST00000606066 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 BCAMP50895 628 aa17.57■□□□□ 0.4
CTSA-211ENST00000606066 GTF2IP78347 998 aa17.57■□□□□ 0.4
CTSA-211ENST00000606066 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
CTSA-211ENST00000606066 MAP1SQ66K74 1059 aaPredicted RBP17.57■□□□□ 0.4
CTSA-211ENST00000606066 RSBN1LQ6PCB5 846 aaPredicted RBP17.57■□□□□ 0.4
CTSA-211ENST00000606066 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
CTSA-211ENST00000606066 DPF2Q92785 391 aa17.57■□□□□ 0.4
CTSA-211ENST00000606066 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
CTSA-211ENST00000606066 MYO3BQ8WXR4 1341 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
CTSA-211ENST00000606066 TNNI3KQ59H18 835 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 FPGT-TNNI3KV9GXZ4 949 aa17.56■□□□□ 0.4
CTSA-211ENST00000606066 SCNN1DP51172 638 aa17.55■□□□□ 0.4
CTSA-211ENST00000606066 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
CTSA-211ENST00000606066 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
CTSA-211ENST00000606066 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
CTSA-211ENST00000606066 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
CTSA-211ENST00000606066 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
CTSA-211ENST00000606066 WDR33Q9C0J8 1336 aaKnown RBP17.54■□□□□ 0.4
CTSA-211ENST00000606066 H7C1D1 291 aa17.54■□□□□ 0.4
CTSA-211ENST00000606066 LBX1P52954 281 aa17.54■□□□□ 0.4
CTSA-211ENST00000606066 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
CTSA-211ENST00000606066 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
CTSA-211ENST00000606066 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
CTSA-211ENST00000606066 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
CTSA-211ENST00000606066 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 FAM205AQ6ZU69 1335 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 APBB1O00213 710 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 SEMA3EO15041 775 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 ZBTB22O15209 634 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 ADORA1P30542 326 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 MMP14P50281 582 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 HDAC1Q13547 482 aaPredicted RBP17.53■□□□□ 0.4
CTSA-211ENST00000606066 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 TBC1D22AQ8WUA7 517 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 CNOT7Q9UIV1 285 aaKnown RBP17.53■□□□□ 0.4
CTSA-211ENST00000606066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
CTSA-211ENST00000606066 ZNF609O15014 1411 aa17.53■□□□□ 0.4
CTSA-211ENST00000606066 EPS15P42566 896 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 CCDC158Q5M9N0 1113 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 MICALL2Q8IY33 904 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
CTSA-211ENST00000606066 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
CTSA-211ENST00000606066 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
CTSA-211ENST00000606066 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
CTSA-211ENST00000606066 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 HSPA8P11142 646 aaKnown RBP17.51■□□□□ 0.39
CTSA-211ENST00000606066 PHKA1P46020 1223 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
CTSA-211ENST00000606066 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
CTSA-211ENST00000606066 GMLQ99445 158 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
CTSA-211ENST00000606066 SCN4AP35499 1836 aa17.51■□□□□ 0.39
CTSA-211ENST00000606066 IFIT2P09913 472 aaKnown RBP17.5■□□□□ 0.39
CTSA-211ENST00000606066 ECE1P42892 770 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 CST9Q5W186 159 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 AACSQ86V21 672 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
CTSA-211ENST00000606066 JAG2Q9Y219 1238 aa17.5■□□□□ 0.39
CTSA-211ENST00000606066 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
CTSA-211ENST00000606066 DBNDD2Q9BQY9 259 aa17.49■□□□□ 0.39
CTSA-211ENST00000606066 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
CTSA-211ENST00000606066 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
CTSA-211ENST00000606066 ZNF280AP59817 542 aaPredicted RBP17.48■□□□□ 0.39
CTSA-211ENST00000606066 KIAA0825Q8IV33 1275 aa17.48■□□□□ 0.39
CTSA-211ENST00000606066 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
CTSA-211ENST00000606066 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
CTSA-211ENST00000606066 SUGT1Q9Y2Z0 365 aa17.48■□□□□ 0.39
CTSA-211ENST00000606066 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
CTSA-211ENST00000606066 NEFLP07196 543 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
CTSA-211ENST00000606066 MAP2K2P36507 400 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
CTSA-211ENST00000606066 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
CTSA-211ENST00000606066 CAPNS2Q96L46 248 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 TLL2Q9Y6L7 1015 aa17.47■□□□□ 0.39
CTSA-211ENST00000606066 ADAMTSL1Q8N6G6 1762 aa17.46■□□□□ 0.39
CTSA-211ENST00000606066 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
CTSA-211ENST00000606066 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms