RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SALL1Q9NSC2 1324 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 COL1A1P02452 1464 aaPredicted RBP14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PSMA5P28066 241 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 HIBADHP31937 336 aaKnown RBP14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 BCAMP50895 628 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 VPS37DQ86XT2 251 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PALD1Q9ULE6 856 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 LAMB1P07942 1786 aa14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 BRCA1P38398 1863 aaKnown RBP14.72□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 TCRBV5S4A2TA0A5A2 114 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PDE6AP16499 860 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 CREB3L3Q68CJ9 461 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 CCDC24Q8N4L8 307 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ZGPATQ8N5A5 531 aaKnown RBP14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ALDH8A1Q9H2A2 487 aaPredicted RBP14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PIH1D3Q9NQM4 214 aaKnown RBP14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 CTNNA3Q9UI47 895 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ATP6V0A2Q9Y487 856 aa14.71□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SLX4Q8IY92 1834 aa14.71□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 PPEF1O14829 653 aaPredicted RBP14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 WASHC4Q2M389 1173 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GRIPAP1Q4V328 841 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SLC9C2Q5TAH2 1124 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 PI16Q6UXB8 463 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ZNF804AQ7Z570 1209 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GGA1Q9UJY5 639 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 FOCADQ5VW36 1801 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 MYH2Q9UKX2 1941 aa14.7□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ZNF646O15015 1829 aaPredicted RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SLC27A2O14975 620 aa14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 IDH1O75874 414 aaKnown RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 HMGB1P09429 215 aaKnown RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 HSPD1P10809 573 aaKnown RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GNAT2P19087 354 aa14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GYG1P46976 350 aa14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 PRPF40BQ6NWY9 871 aaKnown RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ZSWIM6Q9HCJ5 1215 aa14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CDK5RAP2Q96SN8 1893 aa14.69□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SNAP23O00161 211 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 NEK4P51957 841 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ALX1Q15699 326 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SPTY2D1Q68D10 685 aaPredicted RBP14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CC2D2BQ6DHV5 1058 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 TDRD7Q8NHU6 1098 aaKnown RBP14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 WDR66Q8TBY9 1149 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 TTC14Q96N46 770 aa14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 TMX4Q9H1E5 349 aaPredicted RBP14.68□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ZNF532Q9HCE3 1301 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 H0YIN7 160 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 M0R2C6 588 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GPAA1O43292 621 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 IL1R1P14778 569 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 GPSM2P81274 684 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 DEFB132Q7Z7B7 95 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SEC62Q99442 399 aaKnown RBP14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CYP46A1Q9Y6A2 500 aa14.67□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 UFL1O94874 794 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CD2BP2O95400 341 aaKnown RBP14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ANKRD1Q15327 319 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 RUFY3Q7L099 469 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 INTS4Q96HW7 963 aaKnown RBP14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 LRP2BPQ9P2M1 347 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 WWC3Q9ULE0 1092 aa14.66□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 DDIT3P35638 169 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 C2CD5Q86YS7 1000 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 FBXL16Q8N461 479 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 MAGEB6Q8N7X4 407 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 TBC1D22AQ8WUA7 517 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 CWC22Q9HCG8 908 aaKnown RBP14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 NSFL1CQ9UNZ2 370 aaKnown RBP14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 NAV1Q8NEY1 1877 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 WDR19Q8NEZ3 1342 aa14.65□□□□□ -0.06
NEDD8-MDP1-203ENST00000604306 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FRAT2O75474 233 aaPredicted RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CYP21A2P08686 494 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CASTP20810 708 aaKnown RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 KLRK1P26718 216 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CUL4AQ13619 759 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 BLOC1S2Q6QNY1 142 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ZSCAN31Q96LW9 406 aaPredicted RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 JAKMIP1Q96N16 626 aaKnown RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 STRBPQ96SI9 672 aaKnown RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 EYA3Q99504 573 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 COA1Q9GZY4 146 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms