RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 SREBF2Q12772 1141 aa21.51■■□□□ 1.03
CCDC12-210ENST00000604181 EPHA10Q5JZY3 1008 aa21.51■■□□□ 1.03
CCDC12-210ENST00000604181 MYH16Q9H6N6 1097 aa21.51■■□□□ 1.03
CCDC12-210ENST00000604181 IL16Q14005 1332 aa21.51■■□□□ 1.03
CCDC12-210ENST00000604181 ANKRD18BA2A2Z9 1011 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
CCDC12-210ENST00000604181 FKTNO75072 461 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 VAMP4O75379 141 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 DLGAP5Q15398 846 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 C15orf52Q6ZUT6 534 aaKnown RBP21.5■■□□□ 1.03
CCDC12-210ENST00000604181 MTMR14Q8NCE2 650 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 ECM29Q5VYK3 1845 aa21.5■■□□□ 1.03
CCDC12-210ENST00000604181 CLRN2A0PK11 232 aa21.49■■□□□ 1.03
CCDC12-210ENST00000604181 MAP3K11Q16584 847 aa21.49■■□□□ 1.03
CCDC12-210ENST00000604181 FBXO46Q6PJ61 603 aaPredicted RBP21.49■■□□□ 1.03
CCDC12-210ENST00000604181 ZNF594Q96JF6 807 aaPredicted RBP21.49■■□□□ 1.03
CCDC12-210ENST00000604181 PRMT6Q96LA8 375 aaPredicted RBP21.49■■□□□ 1.03
CCDC12-210ENST00000604181 COL1A1P02452 1464 aaPredicted RBP21.49■■□□□ 1.03
CCDC12-210ENST00000604181 IGF2BP3O00425 579 aaKnown RBP eCLIP21.48■■□□□ 1.03
CCDC12-210ENST00000604181 IL1R1P14778 569 aa21.48■■□□□ 1.03
CCDC12-210ENST00000604181 CFAP100Q494V2 611 aa21.48■■□□□ 1.03
CCDC12-210ENST00000604181 PRPF38BQ5VTL8 546 aaKnown RBP21.48■■□□□ 1.03
CCDC12-210ENST00000604181 SPDYE2BA6NHP3 402 aa21.47■■□□□ 1.03
CCDC12-210ENST00000604181 SPDYE6P0CI01 402 aa21.47■■□□□ 1.03
CCDC12-210ENST00000604181 GJA5P36382 358 aa21.47■■□□□ 1.03
CCDC12-210ENST00000604181 BEND3Q5T5X7 828 aa21.47■■□□□ 1.03
CCDC12-210ENST00000604181 NBPF12Q5TAG4 269 aaPredicted RBP21.47■■□□□ 1.03
CCDC12-210ENST00000604181 WNK4Q96J92 1243 aa21.47■■□□□ 1.03
CCDC12-210ENST00000604181 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
CCDC12-210ENST00000604181 KIAA0100Q14667 2235 aaKnown RBP21.47■■□□□ 1.03
CCDC12-210ENST00000604181 EXOSC9Q06265 439 aaKnown RBP21.46■■□□□ 1.03
CCDC12-210ENST00000604181 IFIT5Q13325 482 aaKnown RBP21.46■■□□□ 1.03
CCDC12-210ENST00000604181 IFNL1Q8IU54 200 aa21.46■■□□□ 1.03
CCDC12-210ENST00000604181 SLC10A4Q96EP9 437 aa21.46■■□□□ 1.03
CCDC12-210ENST00000604181 SPINK5Q9NQ38 1064 aaPredicted RBP21.46■■□□□ 1.03
CCDC12-210ENST00000604181 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
CCDC12-210ENST00000604181 LAMB1P07942 1786 aa21.46■■□□□ 1.03
CCDC12-210ENST00000604181 LMBR1LQ6UX01 489 aa21.45■■□□□ 1.02
CCDC12-210ENST00000604181 MANSC4A6NHS7 340 aaPredicted RBP21.44■■□□□ 1.02
CCDC12-210ENST00000604181 PLIN1O60240 522 aa21.44■■□□□ 1.02
CCDC12-210ENST00000604181 CAP1Q01518 475 aa21.44■■□□□ 1.02
CCDC12-210ENST00000604181 VEZTQ9HBM0 779 aa21.44■■□□□ 1.02
CCDC12-210ENST00000604181 USP2O75604 605 aaPredicted RBP21.43■■□□□ 1.02
CCDC12-210ENST00000604181 ZNF804AQ7Z570 1209 aa21.43■■□□□ 1.02
CCDC12-210ENST00000604181 CDAN1Q8IWY9 1227 aa21.43■■□□□ 1.02
CCDC12-210ENST00000604181 PPP2R3BQ9Y5P8 575 aa21.43■■□□□ 1.02
CCDC12-210ENST00000604181 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
CCDC12-210ENST00000604181 ZBTB48P10074 688 aaPredicted RBP21.42■■□□□ 1.02
CCDC12-210ENST00000604181 FKBP1AP62942 108 aaKnown RBP21.42■■□□□ 1.02
CCDC12-210ENST00000604181 RASA3Q14644 834 aa21.42■■□□□ 1.02
CCDC12-210ENST00000604181 OTOP1Q7RTM1 612 aa21.42■■□□□ 1.02
CCDC12-210ENST00000604181 TRIM17Q9Y577 477 aa21.42■■□□□ 1.02
CCDC12-210ENST00000604181 PPP1R12BO60237 982 aaPredicted RBP21.41■■□□□ 1.02
CCDC12-210ENST00000604181 ALDH1A1P00352 501 aa21.41■■□□□ 1.02
CCDC12-210ENST00000604181 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
CCDC12-210ENST00000604181 LDHAL6AQ6ZMR3 332 aa21.41■■□□□ 1.02
CCDC12-210ENST00000604181 PTPN18Q99952 460 aa21.41■■□□□ 1.02
CCDC12-210ENST00000604181 PCDH10Q9P2E7 1040 aa21.41■■□□□ 1.02
CCDC12-210ENST00000604181 POTEFA5A3E0 1075 aa21.4■■□□□ 1.02
CCDC12-210ENST00000604181 GRM8O00222 908 aa21.4■■□□□ 1.02
CCDC12-210ENST00000604181 INHBEP58166 350 aa21.4■■□□□ 1.02
CCDC12-210ENST00000604181 PUS3Q9BZE2 481 aaKnown RBP21.4■■□□□ 1.02
CCDC12-210ENST00000604181 FAM205AQ6ZU69 1335 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 GYG1P46976 350 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 RBM5P52756 815 aaKnown RBP eCLIP21.39■■□□□ 1.01
CCDC12-210ENST00000604181 CRHR2Q13324 411 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 GRIK5Q16478 980 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 SUPT20HL1Q3ZLR7 823 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 WDR63Q8IWG1 891 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
CCDC12-210ENST00000604181 KAZALD1Q96I82 304 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 CNNM1Q9NRU3 951 aa21.39■■□□□ 1.01
CCDC12-210ENST00000604181 MYO1BO43795 1136 aa21.38■■□□□ 1.01
CCDC12-210ENST00000604181 SPDYE2Q495Y8 402 aa21.38■■□□□ 1.01
CCDC12-210ENST00000604181 CD99L2Q8TCZ2 262 aa21.38■■□□□ 1.01
CCDC12-210ENST00000604181 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
CCDC12-210ENST00000604181 TDRD3Q9H7E2 651 aaKnown RBP21.38■■□□□ 1.01
CCDC12-210ENST00000604181 ZNF70Q9UC06 446 aaPredicted RBP21.38■■□□□ 1.01
CCDC12-210ENST00000604181 MFSD14BQ5SR56 506 aa21.37■■□□□ 1.01
CCDC12-210ENST00000604181 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
CCDC12-210ENST00000604181 FAM84BQ96KN1 310 aaPredicted RBP21.37■■□□□ 1.01
CCDC12-210ENST00000604181 TEPSINQ96N21 525 aa21.37■■□□□ 1.01
CCDC12-210ENST00000604181 ELP3Q9H9T3 547 aa21.37■■□□□ 1.01
CCDC12-210ENST00000604181 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
CCDC12-210ENST00000604181 IREB2P48200 963 aaKnown RBP21.36■■□□□ 1.01
CCDC12-210ENST00000604181 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
CCDC12-210ENST00000604181 ANKRD13AQ8IZ07 590 aa21.36■■□□□ 1.01
CCDC12-210ENST00000604181 TTF2Q9UNY4 1162 aaKnown RBP21.36■■□□□ 1.01
CCDC12-210ENST00000604181 ARAP2Q8WZ64 1704 aa21.35■■□□□ 1.01
CCDC12-210ENST00000604181 TESPA1A2RU30 521 aaPredicted RBP21.35■■□□□ 1.01
CCDC12-210ENST00000604181 UNCXA6NJT0 531 aa21.35■■□□□ 1.01
CCDC12-210ENST00000604181 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.35■■□□□ 1.01
CCDC12-210ENST00000604181 MS4A4AQ96JQ5 239 aa21.35■■□□□ 1.01
CCDC12-210ENST00000604181 PTPN22Q9Y2R2 807 aa21.35■■□□□ 1.01
CCDC12-210ENST00000604181 HIBADHP31937 336 aaKnown RBP21.34■■□□□ 1.01
CCDC12-210ENST00000604181 UBE4AQ14139 1066 aa21.34■■□□□ 1.01
CCDC12-210ENST00000604181 DZIP1LQ8IYY4 767 aaKnown RBP21.34■■□□□ 1.01
CCDC12-210ENST00000604181 OPTNQ96CV9 577 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms