RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 NR5A1Q13285 461 aa9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 FAM9BQ8IZU0 186 aa9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 ATG3Q9NT62 314 aa9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 TOGARAM1Q9Y4F4 1720 aa9.44□□□□□ -0.9
UBE2E3-211ENST00000602837 ITGB4P16144 1822 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 LGR5O75473 907 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 TMPOP42166 694 aaKnown RBP9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 RIPK4P57078 832 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 SLC52A2Q9HAB3 445 aa9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
UBE2E3-211ENST00000602837 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 EP400Q96L91 3159 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 APAF1O14727 1248 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 LILRA1O75019 489 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 BRD1O95696 1058 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 NNTQ13423 1086 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 THUMPD2Q9BTF0 503 aaKnown RBP9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
UBE2E3-211ENST00000602837 J3QL48 77 aa9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 HTATSF1O43719 755 aaKnown RBP9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 SEC13P55735 322 aa9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 MIS18AQ9NYP9 233 aa9.41□□□□□ -0.9
UBE2E3-211ENST00000602837 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 GDF9O60383 454 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 SIK1P57059 783 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.9
UBE2E3-211ENST00000602837 KCNQ3O43525 872 aa9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 RBM19Q9Y4C8 960 aaKnown RBP9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
UBE2E3-211ENST00000602837 VIRMAQ69YN4 1812 aaKnown RBP9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 TMEM229AB2RXF0 380 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 CCER2I3L3R5 266 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 PRMT3O60678 531 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 SCNN1AP37088 669 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 SCNN1DP51172 638 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 ITPK1Q13572 414 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 SLC15A2Q16348 729 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 ZNF827Q17R98 1081 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 TSEN2Q8NCE0 465 aaKnown RBP9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
UBE2E3-211ENST00000602837 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 NUP188Q5SRE5 1749 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 RREB1Q92766 1687 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 SSFA2P28290 1259 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 KCNA1Q09470 495 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 CBLBQ13191 982 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 DNAJC10Q8IXB1 793 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 TFCP2L1Q9NZI6 479 aa9.37□□□□□ -0.91
UBE2E3-211ENST00000602837 MRC1P22897 1456 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 GZF1Q9H116 711 aaPredicted RBP9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 TOR4AQ9NXH8 423 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 TSPYL4Q9UJ04 414 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 RGPD3A6NKT7 1758 aaPredicted RBP9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 RGPD4Q7Z3J3 1758 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 LY75O60449 1722 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
UBE2E3-211ENST00000602837 GDF10P55107 478 aa9.35□□□□□ -0.91
UBE2E3-211ENST00000602837 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
UBE2E3-211ENST00000602837 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
UBE2E3-211ENST00000602837 PDGFDQ9GZP0 370 aaPredicted RBP9.35□□□□□ -0.91
UBE2E3-211ENST00000602837 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms