RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 FZD1Q9UP38 647 aa22.59■■□□□ 1.21
SHKBP1-227ENST00000602011 GRM8O00222 908 aa22.58■■□□□ 1.21
SHKBP1-227ENST00000602011 TAF7LQ5H9L4 462 aa22.58■■□□□ 1.21
SHKBP1-227ENST00000602011 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.58■■□□□ 1.21
SHKBP1-227ENST00000602011 LDLRAD1Q5T700 205 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 LMBR1LQ6UX01 489 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 LDHAL6AQ6ZMR3 332 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 CFHR5Q9BXR6 569 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 R3HDMLQ9H3Y0 253 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 C9orf78Q9NZ63 289 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 CHMP3Q9Y3E7 222 aa22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 COL1A1P02452 1464 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-227ENST00000602011 PPP1R12BO60237 982 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 ALDH1A1P00352 501 aa22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 PTPN12Q05209 780 aaKnown RBP22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 SUPT20HL1Q3ZLR7 823 aa22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 DEFB129Q9H1M3 183 aa22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 IRS2Q9Y4H2 1338 aa22.56■■□□□ 1.2
SHKBP1-227ENST00000602011 TAF5LO75529 589 aa22.55■■□□□ 1.2
SHKBP1-227ENST00000602011 MAP3K11Q16584 847 aa22.55■■□□□ 1.2
SHKBP1-227ENST00000602011 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 F6X3S4 739 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 GPR25O00155 361 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 SNAP23O00161 211 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 UBE4AQ14139 1066 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 SRCIN1Q9C0H9 1055 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
SHKBP1-227ENST00000602011 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-227ENST00000602011 SLC10A4Q96EP9 437 aa22.53■■□□□ 1.2
SHKBP1-227ENST00000602011 ANGEL1Q9UNK9 670 aaKnown RBP22.52■■□□□ 1.2
SHKBP1-227ENST00000602011 PCDHAC2Q9Y5I4 1007 aa22.52■■□□□ 1.2
SHKBP1-227ENST00000602011 SPDYE2BA6NHP3 402 aa22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 MANSC4A6NHS7 340 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 SPDYE6P0CI01 402 aa22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 ZBTB48P10074 688 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 SPRYD7Q5W111 196 aa22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 CERS5Q8N5B7 392 aa22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 FAM205AQ6ZU69 1335 aa22.51■■□□□ 1.19
SHKBP1-227ENST00000602011 TNFAIP1Q13829 316 aa22.5■■□□□ 1.19
SHKBP1-227ENST00000602011 CFAP100Q494V2 611 aa22.5■■□□□ 1.19
SHKBP1-227ENST00000602011 EPHA10Q5JZY3 1008 aa22.49■■□□□ 1.19
SHKBP1-227ENST00000602011 SPINK5Q9NQ38 1064 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-227ENST00000602011 HIBADHP31937 336 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 PRPF38BQ5VTL8 546 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 SLC4A10Q6U841 1118 aa22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 TDRD7Q8NHU6 1098 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 PRMT6Q96LA8 375 aaPredicted RBP22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 SERPINA10Q9UK55 444 aa22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 MROH5Q6ZUA9 1318 aa22.48■■□□□ 1.19
SHKBP1-227ENST00000602011 PLIN1O60240 522 aa22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 FKTNO75072 461 aa22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 IREB2P48200 963 aaKnown RBP22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 OTUD7BQ6GQQ9 843 aa22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 UTYO14607 1347 aa22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 AOX1Q06278 1338 aa22.47■■□□□ 1.19
SHKBP1-227ENST00000602011 F8W031 263 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 RBM5P52756 815 aaKnown RBP eCLIP22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 FBXO46Q6PJ61 603 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 CLMNQ96JQ2 1002 aa22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 JAG2Q9Y219 1238 aa22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 SSC5DA1L4H1 1573 aa22.46■■□□□ 1.19
SHKBP1-227ENST00000602011 CLRN2A0PK11 232 aa22.45■■□□□ 1.18
SHKBP1-227ENST00000602011 RIPOR2Q9Y4F9 1068 aa22.45■■□□□ 1.18
SHKBP1-227ENST00000602011 PTPRCP08575 1304 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 MFSD14BQ5SR56 506 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 ANKRD13AQ8IZ07 590 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 TBC1D22AQ8WUA7 517 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 FAM84BQ96KN1 310 aaPredicted RBP22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 VEZTQ9HBM0 779 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 PCDH10Q9P2E7 1040 aa22.44■■□□□ 1.18
SHKBP1-227ENST00000602011 HDLBPQ00341 1268 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 RASA3Q14644 834 aa22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 RABL6Q3YEC7 729 aaPredicted RBP22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 CAVIN4Q5BKX8 364 aa22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 VPS37DQ86XT2 251 aa22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 IFNL1Q8IU54 200 aa22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 MRIQ9BWK5 157 aa22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 TTF2Q9UNY4 1162 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-227ENST00000602011 TNNI2P48788 182 aa22.42■■□□□ 1.18
SHKBP1-227ENST00000602011 SUCLG2Q96I99 432 aa22.42■■□□□ 1.18
SHKBP1-227ENST00000602011 WNK4Q96J92 1243 aa22.42■■□□□ 1.18
SHKBP1-227ENST00000602011 IGF2BP3O00425 579 aaKnown RBP eCLIP22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 USP2O75604 605 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 NBPF7P0C2Y1 421 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 SPDYE2Q495Y8 402 aa22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 NBPF12Q5TAG4 269 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 FBXO33Q7Z6M2 555 aa22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 KAZALD1Q96I82 304 aa22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 HTTP42858 3142 aa22.41■■□□□ 1.18
SHKBP1-227ENST00000602011 ZNF521Q96K83 1311 aa22.4■■□□□ 1.18
SHKBP1-227ENST00000602011 GYG1P46976 350 aa22.4■■□□□ 1.18
SHKBP1-227ENST00000602011 ZNF70Q9UC06 446 aaPredicted RBP22.4■■□□□ 1.18
SHKBP1-227ENST00000602011 SUGT1Q9Y2Z0 365 aa22.4■■□□□ 1.18
SHKBP1-227ENST00000602011 TRIM17Q9Y577 477 aa22.4■■□□□ 1.18
SHKBP1-227ENST00000602011 E9PSI1 815 aa22.39■■□□□ 1.17
SHKBP1-227ENST00000602011 GJA5P36382 358 aa22.39■■□□□ 1.17
SHKBP1-227ENST00000602011 DZIP1LQ8IYY4 767 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms