RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ECM29Q5VYK3 1845 aa28.45■■■□□ 2.14
SSBP4-209ENST00000601357 FAM205AQ6ZU69 1335 aa28.44■■■□□ 2.14
SSBP4-209ENST00000601357 ARAP2Q8WZ64 1704 aa28.44■■■□□ 2.14
SSBP4-209ENST00000601357 MTMR14Q8NCE2 650 aa28.44■■■□□ 2.14
SSBP4-209ENST00000601357 TDRD7Q8NHU6 1098 aaKnown RBP28.44■■■□□ 2.14
SSBP4-209ENST00000601357 KLHDC4Q8TBB5 520 aa28.44■■■□□ 2.14
SSBP4-209ENST00000601357 FAM84BQ96KN1 310 aaPredicted RBP28.44■■■□□ 2.14
SSBP4-209ENST00000601357 GYG1P46976 350 aa28.43■■■□□ 2.14
SSBP4-209ENST00000601357 FKBP1BP68106 108 aa28.43■■■□□ 2.14
SSBP4-209ENST00000601357 MIER1Q8N108 512 aa28.43■■■□□ 2.14
SSBP4-209ENST00000601357 ZIC5Q96T25 663 aa28.43■■■□□ 2.14
SSBP4-209ENST00000601357 BEGAINQ9BUH8 593 aa28.43■■■□□ 2.14
SSBP4-209ENST00000601357 API5Q9BZZ5 524 aaKnown RBP28.43■■■□□ 2.14
SSBP4-209ENST00000601357 HIBADHP31937 336 aaKnown RBP28.42■■■□□ 2.14
SSBP4-209ENST00000601357 RFX5P48382 616 aaPredicted RBP28.42■■■□□ 2.14
SSBP4-209ENST00000601357 CCDC102AQ96A19 550 aa28.42■■■□□ 2.14
SSBP4-209ENST00000601357 PDE8BO95263 885 aa28.41■■■□□ 2.14
SSBP4-209ENST00000601357 METTL24Q5JXM2 366 aa28.41■■■□□ 2.14
SSBP4-209ENST00000601357 ZNF157P51786 506 aaPredicted RBP28.4■■■□□ 2.14
SSBP4-209ENST00000601357 PRAMEF18Q5VWM3 479 aa28.4■■■□□ 2.14
SSBP4-209ENST00000601357 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
SSBP4-209ENST00000601357 APOBEC3FQ8IUX4 373 aaKnown RBP28.4■■■□□ 2.14
SSBP4-209ENST00000601357 ARHGAP45Q92619 1136 aa28.4■■■□□ 2.14
SSBP4-209ENST00000601357 JAG2Q9Y219 1238 aa28.4■■■□□ 2.14
SSBP4-209ENST00000601357 KIF16BQ96L93 1317 aa28.4■■■□□ 2.14
SSBP4-209ENST00000601357 CA12O43570 354 aa28.39■■■□□ 2.14
SSBP4-209ENST00000601357 SLC10A3P09131 477 aa28.39■■■□□ 2.14
SSBP4-209ENST00000601357 UBTFL1P0CB47 393 aaPredicted RBP28.39■■■□□ 2.14
SSBP4-209ENST00000601357 DLGAP5Q15398 846 aa28.39■■■□□ 2.14
SSBP4-209ENST00000601357 FBXO33Q7Z6M2 555 aa28.39■■■□□ 2.14
SSBP4-209ENST00000601357 PTPN12Q05209 780 aaKnown RBP28.38■■■□□ 2.13
SSBP4-209ENST00000601357 PCDHAC2Q9Y5I4 1007 aa28.38■■■□□ 2.13
SSBP4-209ENST00000601357 COL1A1P02452 1464 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-209ENST00000601357 F8W031 263 aaPredicted RBP28.37■■■□□ 2.13
SSBP4-209ENST00000601357 SPDYE2BA6NHP3 402 aa28.36■■■□□ 2.13
SSBP4-209ENST00000601357 SPDYE6P0CI01 402 aa28.36■■■□□ 2.13
SSBP4-209ENST00000601357 FGFR2P21802 821 aa28.36■■■□□ 2.13
SSBP4-209ENST00000601357 CFAP100Q494V2 611 aa28.36■■■□□ 2.13
SSBP4-209ENST00000601357 MFSD14BQ5SR56 506 aa28.36■■■□□ 2.13
SSBP4-209ENST00000601357 EYA2O00167 538 aa28.35■■■□□ 2.13
SSBP4-209ENST00000601357 INTS3Q68E01 1043 aaKnown RBP28.35■■■□□ 2.13
SSBP4-209ENST00000601357 MOB2Q70IA6 237 aa28.35■■■□□ 2.13
SSBP4-209ENST00000601357 KIF23Q02241 960 aaPredicted RBP28.34■■■□□ 2.13
SSBP4-209ENST00000601357 PUM3Q15397 648 aaKnown RBP28.34■■■□□ 2.13
SSBP4-209ENST00000601357 ATG9AQ7Z3C6 839 aa28.34■■■□□ 2.13
SSBP4-209ENST00000601357 RASAL3Q86YV0 1011 aa28.34■■■□□ 2.13
SSBP4-209ENST00000601357 PRMT6Q96LA8 375 aaPredicted RBP28.34■■■□□ 2.13
SSBP4-209ENST00000601357 TSKSQ9UJT2 592 aa28.34■■■□□ 2.13
SSBP4-209ENST00000601357 CAVIN4Q5BKX8 364 aa28.33■■■□□ 2.13
SSBP4-209ENST00000601357 MEIS3Q99687 375 aa28.33■■■□□ 2.13
SSBP4-209ENST00000601357 AOX1Q06278 1338 aa28.33■■■□□ 2.13
SSBP4-209ENST00000601357 UBE2Q2LH0YL09 131 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 NF2P35240 595 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 VPS37DQ86XT2 251 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 DEFB129Q9H1M3 183 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 FBXO3Q9UK99 471 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 HDAC5Q9UQL6 1122 aa28.32■■■□□ 2.12
SSBP4-209ENST00000601357 LRRFIP2Q9Y608 721 aaKnown RBP28.32■■■□□ 2.12
SSBP4-209ENST00000601357 SERPINA10Q9UK55 444 aa28.31■■■□□ 2.12
SSBP4-209ENST00000601357 IQSEC3Q9UPP2 1182 aaPredicted RBP28.31■■■□□ 2.12
SSBP4-209ENST00000601357 MYO1BO43795 1136 aa28.3■■■□□ 2.12
SSBP4-209ENST00000601357 CIAO1O76071 339 aa28.3■■■□□ 2.12
SSBP4-209ENST00000601357 BCAMP50895 628 aa28.3■■■□□ 2.12
SSBP4-209ENST00000601357 TTF2Q9UNY4 1162 aaKnown RBP28.3■■■□□ 2.12
SSBP4-209ENST00000601357 PPP2R3BQ9Y5P8 575 aa28.3■■■□□ 2.12
SSBP4-209ENST00000601357 SSC5DA1L4H1 1573 aa28.29■■■□□ 2.12
SSBP4-209ENST00000601357 BCAR3O75815 825 aa28.29■■■□□ 2.12
SSBP4-209ENST00000601357 IFIT1P09914 478 aaKnown RBP28.29■■■□□ 2.12
SSBP4-209ENST00000601357 TRIM27P14373 513 aa28.29■■■□□ 2.12
SSBP4-209ENST00000601357 HNRNPUQ00839 825 aaKnown RBP eCLIP28.29■■■□□ 2.12
SSBP4-209ENST00000601357 CSRNP1Q96S65 589 aa28.29■■■□□ 2.12
SSBP4-209ENST00000601357 AKAP11Q9UKA4 1901 aa28.28■■■□□ 2.12
SSBP4-209ENST00000601357 CLRN2A0PK11 232 aa28.28■■■□□ 2.12
SSBP4-209ENST00000601357 IPO8O15397 1037 aaKnown RBP28.28■■■□□ 2.12
SSBP4-209ENST00000601357 GRIK5Q16478 980 aa28.28■■■□□ 2.12
SSBP4-209ENST00000601357 LPIN2Q92539 896 aa28.28■■■□□ 2.12
SSBP4-209ENST00000601357 SAGE1Q9NXZ1 904 aa28.28■■■□□ 2.12
SSBP4-209ENST00000601357 CAPN15O75808 1086 aa28.27■■■□□ 2.12
SSBP4-209ENST00000601357 RBM5P52756 815 aaKnown RBP eCLIP28.27■■■□□ 2.12
SSBP4-209ENST00000601357 TTLL12Q14166 644 aaPredicted RBP28.27■■■□□ 2.12
SSBP4-209ENST00000601357 TBC1D22AQ8WUA7 517 aa28.27■■■□□ 2.12
SSBP4-209ENST00000601357 MYH13Q9UKX3 1938 aa28.27■■■□□ 2.12
SSBP4-209ENST00000601357 ATF7IPQ6VMQ6 1270 aa28.26■■■□□ 2.11
SSBP4-209ENST00000601357 REM2Q8IYK8 340 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-209ENST00000601357 SIL1Q9H173 461 aa28.26■■■□□ 2.11
SSBP4-209ENST00000601357 FRAT2O75474 233 aaPredicted RBP28.25■■■□□ 2.11
SSBP4-209ENST00000601357 GNAI3P08754 354 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 SLC5A1P13866 664 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 CHAF1AQ13111 956 aaPredicted RBP28.25■■■□□ 2.11
SSBP4-209ENST00000601357 SPDYE2Q495Y8 402 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 LDLRAD1Q5T700 205 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 ARMC9Q7Z3E5 817 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 COPRSQ9NQ92 184 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 TNNQ9UQP3 1299 aa28.25■■■□□ 2.11
SSBP4-209ENST00000601357 CRKP46108 304 aa28.24■■■□□ 2.11
SSBP4-209ENST00000601357 MAP3K11Q16584 847 aa28.24■■■□□ 2.11
SSBP4-209ENST00000601357 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
SSBP4-209ENST00000601357 VEZTQ9HBM0 779 aa28.24■■■□□ 2.11
SSBP4-209ENST00000601357 RNF186Q9NXI6 227 aa28.24■■■□□ 2.11
SSBP4-209ENST00000601357 CASP8AP2Q9UKL3 1982 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms