RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 ECM29Q5VYK3 1845 aa18.94■□□□□ 0.62
SHKBP1-226ENST00000600791 CCER2I3L3R5 266 aa18.93■□□□□ 0.62
SHKBP1-226ENST00000600791 UBE4AQ14139 1066 aa18.93■□□□□ 0.62
SHKBP1-226ENST00000600791 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
SHKBP1-226ENST00000600791 SMC4Q9NTJ3 1288 aa18.93■□□□□ 0.62
SHKBP1-226ENST00000600791 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
SHKBP1-226ENST00000600791 ARAP2Q8WZ64 1704 aa18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 CASP8AP2Q9UKL3 1982 aa18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 FKBP1AP62942 108 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 APOBEC3FQ8IUX4 373 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 USP44Q9H0E7 712 aa18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 RIPOR2Q9Y4F9 1068 aa18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 MROH5Q6ZUA9 1318 aa18.92■□□□□ 0.62
SHKBP1-226ENST00000600791 F8W031 263 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-226ENST00000600791 GYG1P46976 350 aa18.91■□□□□ 0.62
SHKBP1-226ENST00000600791 DLGAP5Q15398 846 aa18.91■□□□□ 0.62
SHKBP1-226ENST00000600791 MTMR14Q8NCE2 650 aa18.91■□□□□ 0.62
SHKBP1-226ENST00000600791 PCDHAC2Q9Y5I4 1007 aa18.91■□□□□ 0.62
SHKBP1-226ENST00000600791 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 UBE2Q2LH0YL09 131 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 NF2P35240 595 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 LRRC24Q50LG9 513 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 ABHD8Q96I13 439 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 FAM205AQ6ZU69 1335 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
SHKBP1-226ENST00000600791 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-226ENST00000600791 TTLL12Q14166 644 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-226ENST00000600791 FAM84BQ96KN1 310 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-226ENST00000600791 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
SHKBP1-226ENST00000600791 SAGE1Q9NXZ1 904 aa18.89■□□□□ 0.61
SHKBP1-226ENST00000600791 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 CFAP100Q494V2 611 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 METTL24Q5JXM2 366 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 VGLL2Q8N8G2 317 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 KLHDC4Q8TBB5 520 aa18.88■□□□□ 0.61
SHKBP1-226ENST00000600791 AOX1Q06278 1338 aa18.87■□□□□ 0.61
SHKBP1-226ENST00000600791 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
SHKBP1-226ENST00000600791 DEFB129Q9H1M3 183 aa18.87■□□□□ 0.61
SHKBP1-226ENST00000600791 RNF186Q9NXI6 227 aa18.87■□□□□ 0.61
SHKBP1-226ENST00000600791 SSC5DA1L4H1 1573 aa18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 TRPA1O75762 1119 aa18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 PDE8BO95263 885 aa18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 PRMT6Q96LA8 375 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 NOB1Q9ULX3 412 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-226ENST00000600791 MYO1BO43795 1136 aa18.85■□□□□ 0.61
SHKBP1-226ENST00000600791 PRKG1Q13976 671 aa18.85■□□□□ 0.61
SHKBP1-226ENST00000600791 ARMC9Q7Z3E5 817 aa18.85■□□□□ 0.61
SHKBP1-226ENST00000600791 FBXO33Q7Z6M2 555 aa18.85■□□□□ 0.61
SHKBP1-226ENST00000600791 REM2Q8IYK8 340 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-226ENST00000600791 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 VPS37DQ86XT2 251 aa18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 PPP2R3BQ9Y5P8 575 aa18.84■□□□□ 0.61
SHKBP1-226ENST00000600791 UBTFL1P0CB47 393 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 CAVIN4Q5BKX8 364 aa18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 MCOLN1Q9GZU1 580 aa18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 SERPINA10Q9UK55 444 aa18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 ANGEL1Q9UNK9 670 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-226ENST00000600791 EYA2O00167 538 aa18.82■□□□□ 0.6
SHKBP1-226ENST00000600791 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-226ENST00000600791 LDLRAD1Q5T700 205 aa18.82■□□□□ 0.6
SHKBP1-226ENST00000600791 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 FGFR2P21802 821 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 BCAMP50895 628 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 MKRN3Q13064 507 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 CHAF1AQ13111 956 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 DGKZQ13574 1117 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 GRIK5Q16478 980 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
SHKBP1-226ENST00000600791 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 CRKP46108 304 aa18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 RASA3Q14644 834 aa18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 TDRD3Q9H7E2 651 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 ZNF70Q9UC06 446 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
SHKBP1-226ENST00000600791 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 ATG9AQ7Z3C6 839 aa18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 TBC1D22AQ8WUA7 517 aa18.79■□□□□ 0.6
SHKBP1-226ENST00000600791 LAMB1P07942 1786 aa18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 CCDC85CA6NKD9 419 aa18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 TM4SF4P48230 202 aa18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
SHKBP1-226ENST00000600791 SIL1Q9H173 461 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms