RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ATP6V0A2Q9Y487 856 aa21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 U3KPZ7 1027 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 PDS5AQ29RF7 1337 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 ZKSCAN1P17029 563 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 DSCC1Q9BVC3 393 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 GGA1Q9UJY5 639 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 H0YIN7 160 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 M0R2C6 588 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 PDE6AP16499 860 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 CREB3L3Q68CJ9 461 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 C2CD5Q86YS7 1000 aa21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 IQSEC3Q9UPP2 1182 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-224ENST00000600718 STYK1Q6J9G0 422 aa21.15■□□□□ 0.98
SHKBP1-224ENST00000600718 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
SHKBP1-224ENST00000600718 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-224ENST00000600718 SLC27A2O14975 620 aa21.14■□□□□ 0.98
SHKBP1-224ENST00000600718 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.98
SHKBP1-224ENST00000600718 NEK4P51957 841 aa21.14■□□□□ 0.98
SHKBP1-224ENST00000600718 TXNRD3Q86VQ6 643 aa21.14■□□□□ 0.98
SHKBP1-224ENST00000600718 LRP2BPQ9P2M1 347 aa21.14■□□□□ 0.98
SHKBP1-224ENST00000600718 ZNF532Q9HCE3 1301 aa21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 TCRBV5S4A2TA0A5A2 114 aa21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 UFL1O94874 794 aa21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 SLC51AQ86UW1 340 aa21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 PUS7LQ9H0K6 701 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.97
SHKBP1-224ENST00000600718 K7ELQ4 463 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-224ENST00000600718 CD2BP2O95400 341 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-224ENST00000600718 ZNF622Q969S3 477 aaKnown RBP eCLIP21.13■□□□□ 0.972e-8■□□□□ 10.5
SHKBP1-224ENST00000600718 TM6SF1Q9BZW5 370 aa21.13■□□□□ 0.97
SHKBP1-224ENST00000600718 HSPD1P10809 573 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 TSGA10IPQ3SY00 556 aa21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 ZNF804AQ7Z570 1209 aa21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 MCM2P49736 904 aa21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 MAGEB6Q8N7X4 407 aa21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 TBC1D16Q8TBP0 767 aa21.12■□□□□ 0.97
SHKBP1-224ENST00000600718 MYH7P12883 1935 aa21.11■□□□□ 0.97
SHKBP1-224ENST00000600718 VPS53Q5VIR6 699 aa21.11■□□□□ 0.97
SHKBP1-224ENST00000600718 TDRD7Q8NHU6 1098 aaKnown RBP21.11■□□□□ 0.97
SHKBP1-224ENST00000600718 COL1A1P02452 1464 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 LRRC37AA6NMS7 1700 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 GPAA1O43292 621 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 ABCF2Q9UG63 623 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 POLLQ9UGP5 575 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 DOCK2Q92608 1830 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 PSMA5P28066 241 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 CNKSR1Q969H4 720 aa21.1■□□□□ 0.97
SHKBP1-224ENST00000600718 C6orf229H3BNL8 230 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 IGSF3O75054 1194 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 KRT32Q14532 448 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 MPNDQ8N594 471 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 RAI14Q9P0K7 980 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 CTNNA3Q9UI47 895 aa21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-224ENST00000600718 TMED8Q6PL24 325 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-224ENST00000600718 JAKMIP1Q96N16 626 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-224ENST00000600718 UPF3BQ9BZI7 483 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-224ENST00000600718 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
SHKBP1-224ENST00000600718 AIDAQ96BJ3 306 aa21.08■□□□□ 0.96
SHKBP1-224ENST00000600718 CHAF1AQ13111 956 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 ADCK5Q3MIX3 580 aa21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 ZGPATQ8N5A5 531 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 WDR66Q8TBY9 1149 aa21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 GPR101Q96P66 508 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 CD209Q9NNX6 404 aa21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 SALL1Q9NSC2 1324 aa21.07■□□□□ 0.96
SHKBP1-224ENST00000600718 IL1R1P14778 569 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 CASTP20810 708 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 CHRNA5P30532 468 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 SPTY2D1Q68D10 685 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 STRBPQ96SI9 672 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 CYP46A1Q9Y6A2 500 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 MYO5AQ9Y4I1 1855 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 C10orf71Q711Q0 1435 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 CYP21A2P08686 494 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 CYP7A1P22680 504 aa21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 DPP8Q6V1X1 898 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 UPF1Q92900 1129 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHKBP1-224ENST00000600718 RPAP1Q9BWH6 1393 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 LTBP1Q14766 1721 aa21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 FOXP2O15409 715 aa21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 RUFY3Q7L099 469 aa21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 NBR1Q14596 966 aa21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 TTC14Q96N46 770 aa21.05■□□□□ 0.96
SHKBP1-224ENST00000600718 FGAP02671 866 aa21.04■□□□□ 0.96
SHKBP1-224ENST00000600718 GNAT2P19087 354 aa21.04■□□□□ 0.96
SHKBP1-224ENST00000600718 NAA16Q6N069 864 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-224ENST00000600718 ZC3H12CQ9C0D7 883 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-224ENST00000600718 MBD4O95243 580 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 BLOC1S2Q6QNY1 142 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 SPRYD3Q8NCJ5 442 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 PDRG1Q9NUG6 133 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 HSP90AA1P07900 732 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 ALX1Q15699 326 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 CC2D2BQ6DHV5 1058 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 NSUN4Q96CB9 384 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 EYA3Q99504 573 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms