RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CERS5Q8N5B7 392 aa19.85■□□□□ 0.77
VRK3-221ENST00000600284 TDRD7Q8NHU6 1098 aaKnown RBP19.85■□□□□ 0.77
VRK3-221ENST00000600284 FAM205AQ6ZU69 1335 aa19.84■□□□□ 0.77
VRK3-221ENST00000600284 SLC10A3P09131 477 aa19.84■□□□□ 0.77
VRK3-221ENST00000600284 HIBADHP31937 336 aaKnown RBP19.84■□□□□ 0.77
VRK3-221ENST00000600284 NF2P35240 595 aa19.84■□□□□ 0.77
VRK3-221ENST00000600284 DLGAP5Q15398 846 aa19.84■□□□□ 0.77
VRK3-221ENST00000600284 FAM84BQ96KN1 310 aaPredicted RBP19.84■□□□□ 0.77
VRK3-221ENST00000600284 REM2Q8IYK8 340 aaPredicted RBP19.83■□□□□ 0.77
VRK3-221ENST00000600284 ZIC5Q96T25 663 aa19.83■□□□□ 0.77
VRK3-221ENST00000600284 API5Q9BZZ5 524 aaKnown RBP19.83■□□□□ 0.77
VRK3-221ENST00000600284 PDE8BO95263 885 aa19.82■□□□□ 0.76
VRK3-221ENST00000600284 KIF23Q02241 960 aaPredicted RBP19.82■□□□□ 0.76
VRK3-221ENST00000600284 LRRC24Q50LG9 513 aa19.82■□□□□ 0.76
VRK3-221ENST00000600284 NOB1Q9ULX3 412 aaKnown RBP19.82■□□□□ 0.76
VRK3-221ENST00000600284 SCAF8Q9UPN6 1271 aaKnown RBP19.82■□□□□ 0.76
VRK3-221ENST00000600284 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
VRK3-221ENST00000600284 PAPPA2Q9BXP8 1791 aa19.82■□□□□ 0.76
VRK3-221ENST00000600284 GYG1P46976 350 aa19.81■□□□□ 0.76
VRK3-221ENST00000600284 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
VRK3-221ENST00000600284 FBXO33Q7Z6M2 555 aa19.81■□□□□ 0.76
VRK3-221ENST00000600284 COL1A1P02452 1464 aaPredicted RBP19.8■□□□□ 0.76
VRK3-221ENST00000600284 MYO1BO43795 1136 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 RARSP54136 660 aaKnown RBP19.8■□□□□ 0.76
VRK3-221ENST00000600284 CFAP100Q494V2 611 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 PRAMEF18Q5VWM3 479 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 ARHGAP45Q92619 1136 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 SAGE1Q9NXZ1 904 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 PPP2R3BQ9Y5P8 575 aa19.8■□□□□ 0.76
VRK3-221ENST00000600284 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 F8W031 263 aaPredicted RBP19.79■□□□□ 0.76
VRK3-221ENST00000600284 CAPN15O75808 1086 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 MFSD14BQ5SR56 506 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 VPS37DQ86XT2 251 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 RASAL3Q86YV0 1011 aa19.79■□□□□ 0.76
VRK3-221ENST00000600284 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
VRK3-221ENST00000600284 RFX5P48382 616 aaPredicted RBP19.78■□□□□ 0.76
VRK3-221ENST00000600284 TTLL12Q14166 644 aaPredicted RBP19.78■□□□□ 0.76
VRK3-221ENST00000600284 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 KLHDC4Q8TBB5 520 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 CSRNP1Q96S65 589 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 DEFB129Q9H1M3 183 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 TSKSQ9UJT2 592 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 SERPINA10Q9UK55 444 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 FBXO3Q9UK99 471 aa19.78■□□□□ 0.76
VRK3-221ENST00000600284 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.76
VRK3-221ENST00000600284 EYA2O00167 538 aa19.77■□□□□ 0.76
VRK3-221ENST00000600284 PTPN12Q05209 780 aaKnown RBP19.77■□□□□ 0.76
VRK3-221ENST00000600284 MOB2Q70IA6 237 aa19.77■□□□□ 0.76
VRK3-221ENST00000600284 TBC1D22AQ8WUA7 517 aa19.77■□□□□ 0.76
VRK3-221ENST00000600284 PRMT6Q96LA8 375 aaPredicted RBP19.77■□□□□ 0.76
VRK3-221ENST00000600284 JAG2Q9Y219 1238 aa19.77■□□□□ 0.76
VRK3-221ENST00000600284 IFIT1P09914 478 aaKnown RBP19.76■□□□□ 0.75
VRK3-221ENST00000600284 FGFR2P21802 821 aa19.76■□□□□ 0.75
VRK3-221ENST00000600284 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
VRK3-221ENST00000600284 TTF2Q9UNY4 1162 aaKnown RBP19.76■□□□□ 0.75
VRK3-221ENST00000600284 RBM5P52756 815 aaKnown RBP eCLIP19.75■□□□□ 0.75
VRK3-221ENST00000600284 RNF186Q9NXI6 227 aa19.75■□□□□ 0.75
VRK3-221ENST00000600284 PCDHAC2Q9Y5I4 1007 aa19.75■□□□□ 0.75
VRK3-221ENST00000600284 UNCXA6NJT0 531 aa19.74■□□□□ 0.75
VRK3-221ENST00000600284 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
VRK3-221ENST00000600284 FRAT2O75474 233 aaPredicted RBP19.74■□□□□ 0.75
VRK3-221ENST00000600284 CIAO1O76071 339 aa19.74■□□□□ 0.75
VRK3-221ENST00000600284 HDLBPQ00341 1268 aaKnown RBP19.74■□□□□ 0.75
VRK3-221ENST00000600284 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
VRK3-221ENST00000600284 SUPT20HL1Q3ZLR7 823 aa19.74■□□□□ 0.75
VRK3-221ENST00000600284 LDLRAD1Q5T700 205 aa19.74■□□□□ 0.75
VRK3-221ENST00000600284 INTS3Q68E01 1043 aaKnown RBP19.74■□□□□ 0.75
VRK3-221ENST00000600284 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
VRK3-221ENST00000600284 TRPA1O75762 1119 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 BCAMP50895 628 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 TNFAIP1Q13829 316 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 ATG9AQ7Z3C6 839 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 LPIN2Q92539 896 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 ABHD8Q96I13 439 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 MRIQ9BWK5 157 aa19.73■□□□□ 0.75
VRK3-221ENST00000600284 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
VRK3-221ENST00000600284 SLC5A1P13866 664 aa19.72■□□□□ 0.75
VRK3-221ENST00000600284 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
VRK3-221ENST00000600284 VEZTQ9HBM0 779 aa19.72■□□□□ 0.75
VRK3-221ENST00000600284 ANGEL1Q9UNK9 670 aaKnown RBP19.72■□□□□ 0.75
VRK3-221ENST00000600284 SUGT1Q9Y2Z0 365 aa19.72■□□□□ 0.75
VRK3-221ENST00000600284 GNAI3P08754 354 aa19.71■□□□□ 0.75
VRK3-221ENST00000600284 CRKP46108 304 aa19.71■□□□□ 0.75
VRK3-221ENST00000600284 TM4SF4P48230 202 aa19.71■□□□□ 0.75
VRK3-221ENST00000600284 DZIP1LQ8IYY4 767 aaKnown RBP19.71■□□□□ 0.75
VRK3-221ENST00000600284 CEP126Q9P2H0 1117 aa19.71■□□□□ 0.75
VRK3-221ENST00000600284 ZNF70Q9UC06 446 aaPredicted RBP19.71■□□□□ 0.75
VRK3-221ENST00000600284 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
VRK3-221ENST00000600284 LRRFIP2Q9Y608 721 aaKnown RBP19.71■□□□□ 0.75
VRK3-221ENST00000600284 ECM29Q5VYK3 1845 aa19.71■□□□□ 0.75
VRK3-221ENST00000600284 CHAF1AQ13111 956 aaPredicted RBP19.7■□□□□ 0.74
VRK3-221ENST00000600284 PRKG1Q13976 671 aa19.7■□□□□ 0.74
VRK3-221ENST00000600284 RASA3Q14644 834 aa19.7■□□□□ 0.74
VRK3-221ENST00000600284 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
VRK3-221ENST00000600284 MEIS3Q99687 375 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms